Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0277 ATGCCTTCATACCTGATTACACATATAGCATCAGAAGTTATTACTATATCGATCTTAACGAAGATGAGTACTGTGCCAAAATTCTCATCAATGCTTCCTCTCTTGGCTGTCCTAGCCATATTATCACAAGTCTCTTATGCCCAAAACTCGCGCCAGAACTACCTCAACGCACACAACGCAGCACGTTCCCAAGTTGGGGTTGGTTCTATTACATGGGATCCAACTCTTGCCGATTATGCACAGAAACACGTGAACAAACTCAAGGGAACCTGTCGGCTGGTGCACTCTGGGGGTCCCTATGGTGAGAACCTTGCGAGGAGCAGTGGAGATCTTACAGGCACTGCTGCCGTCAAATTGTGGGTGGATGAGAAGCCATACTATAACTACAACTCCAACTCGTGCGTTGGTGGTAAAGAGTGCCGCCACTATACTCAGGTGGTTTGGCGCAAATCGGTTCATCTTGGATGTGCCAAAGTAAGATGTGACAATGGAGGCACAATAATCAGCTGCAACTATGATCCCCCAGGCAACCGTGCTGGCCAAAGGCCTTACTAG 555 0.4793 MPSYLITHIASEVITISILTKMSTVPKFSSMLPLLAVLAILSQVSYAQNSRQNYLNAHNAARSQVGVGSITWDPTLADYAQKHVNKLKGTCRLVHSGGPYGENLARSSGDLTGTAAVKLWVDEKPYYNYNSNSCVGGKECRHYTQVVWRKSVHLGCAKVRCDNGGTIISCNYDPPGNRAGQRPY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0277 184 CDD CAP_PR-1 52 184 - -
Dod03g0277 184 PANTHER PATHOGENESIS-RELATED PROTEIN 1 39 184 - -
Dod03g0277 184 SUPERFAMILY PR-1-like 41 184 IPR035940 -
Dod03g0277 184 ProSitePatterns CRISP family signature 1. 141 151 IPR018244 GO:0005576
Dod03g0277 184 Pfam Cysteine-rich secretory protein family 55 172 IPR014044 -
Dod03g0277 184 PRINTS Allergen V5/Tpx-1 family signature 167 180 IPR001283 -
Dod03g0277 184 PRINTS Allergen V5/Tpx-1 family signature 140 156 IPR001283 -
Dod03g0277 184 PRINTS Allergen V5/Tpx-1 family signature 70 88 IPR001283 -
Dod03g0277 184 PRINTS Allergen V5/Tpx-1 family signature 116 129 IPR001283 -
Dod03g0277 184 Gene3D CAP 48 184 IPR035940 -
Dod03g0277 184 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 39 184 IPR001283 -
Dod03g0277 184 SMART SCP_3 49 180 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0277 Dod-Chr3 2970861 2971415 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0277 K13449 - pop:18095154 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0277 03 2970861 2971415 Dod03g0277 03 2970861 2971415 ECH