Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0275 ATGAGTACTGTGCCAAAAGTCTCATCAATGCTTCCTCTCTTGGCTGTCCTAGCCATATTATCACAAGTCTCTTATGCCCAAAACTCGCGCCGGAACTACCTCAGCGCACACAACGCAGCACGTTCCCAAGTTGGGGTTGGTTCTATAACATGGGATCCAACTCTTGCCGATTATGCACAGAAACACGTGAACAAACTCAAGGGAACCTGTCGGCTGGTGCACTCTGGGGGTCCCTATGGTGAGAACCTTGCGAGGAGCAGTGGAGATCTTACAGGCACTGCTGCCGTCAAATTGTGGGTGGATGAGAAGCCATACTATAACTACAACTCCAACTCGTGCGTTGGTGGTAAAGAGTGCCGCCACTATACTCAGGTGGTTTGGCGCAAATCGGTTCATCTTGGATGTGCCAAAGTAAGATGTGACAATGGAGGCACAATAATCAGCTGCAACTATGATCCCCCAGGCAACCGTGCTGGCCAAAGGCCTTACTAG 492 0.5041 MSTVPKVSSMLPLLAVLAILSQVSYAQNSRRNYLSAHNAARSQVGVGSITWDPTLADYAQKHVNKLKGTCRLVHSGGPYGENLARSSGDLTGTAAVKLWVDEKPYYNYNSNSCVGGKECRHYTQVVWRKSVHLGCAKVRCDNGGTIISCNYDPPGNRAGQRPY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0275 163 ProSitePatterns CRISP family signature 1. 120 130 IPR018244 GO:0005576
Dod03g0275 163 PANTHER PATHOGENESIS-RELATED PROTEIN 1 19 163 - -
Dod03g0275 163 Gene3D CAP 27 163 IPR035940 -
Dod03g0275 163 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 19 163 IPR001283 -
Dod03g0275 163 SUPERFAMILY PR-1-like 21 163 IPR035940 -
Dod03g0275 163 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Dod03g0275 163 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Dod03g0275 163 PRINTS Allergen V5/Tpx-1 family signature 146 159 IPR001283 -
Dod03g0275 163 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Dod03g0275 163 CDD CAP_PR-1 31 163 - -
Dod03g0275 163 Pfam Cysteine-rich secretory protein family 34 151 IPR014044 -
Dod03g0275 163 SMART SCP_3 28 159 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0275 Dod-Chr3 2932615 2933106 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0275 K13449 - pop:18095154 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0275 03 2932615 2933106 Dod03g0275 03 2932615 2933106 ECH