Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0274 ATGGGGTTATGCAAGGGCAAGGCCACATTTTCTCCATCGTGTGCCTTGGGATTAATCATCATTGTTATGGGTCATGCTGCCTACTCGCAAGACACACCAGCAGACTACCTCGAAGTCCACAACGCCGCAAGGTCCGAGGTTGGCGTCCCGCCTTTGACATGGGACGACACCGTCGCTGCTTTCGCGCTGAGTTATGCAAAGCAGCATGAATGCACGTGCGAATTGGAGCACTCAGGTGATGAACGTTACGGGGAGAACCTCGCAGGCAGTGGTGGCGACTTCAATGGTGATGATGCAGTGAGAATGTGGGTGGGTGAGAAGCCAAACTACCACTACTATTCTAACTCGTGCGTTGGTGGGGAGTGCCTCCACCACACTCAGTTGTTTGGAGAGATTCCACCCGCCTTGGATGTGCCAAAGTGA 423 0.5366 MGLCKGKATFSPSCALGLIIIVMGHAAYSQDTPADYLEVHNAARSEVGVPPLTWDDTVAAFALSYAKQHECTCELEHSGDERYGENLAGSGGDFNGDDAVRMWVGEKPNYHYYSNSCVGGECLHHTQLFGEIPPALDVPK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0274 140 SMART SCP_3 31 140 IPR014044 -
Dod03g0274 140 Pfam Cysteine-rich secretory protein family 37 128 IPR014044 -
Dod03g0274 140 Gene3D CAP 26 131 IPR035940 -
Dod03g0274 140 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 20 128 IPR001283 -
Dod03g0274 140 SUPERFAMILY PR-1-like 29 129 IPR035940 -
Dod03g0274 140 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 20 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0274 Dod-Chr3 2906867 2907289 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0274 K13449 - gmx:100805116 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0274 03 2906867 2907289 Dod03g0274 03 2906867 2907289 ECH