Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0273 ATGGGTTCATTTTCTCTATTGTGTGTATTGGGGTTAGTCATTGTAGGCCATGTAGCCTACGCACAAGACTCACCACAAGACTACCTTGATGCCCACAACGCTGCAAGGTCAGAGGTGAACGTCCCAAATTTGGTTTGGGATGACACCGTTGCTGCTTTTGCACAAAACTATGCTAATCAACGCCAAGGAGATTGCCAACTGATCCATTCAGGTGGTGGAGGGCGTTATGGTGAGAACCTCGCAGGCAGCAGCGGAGACTTGAGTGGCAAAGACGCAGTGGGATTGTGGGTGAATGAGAAATCCAACTATGACTACAATTCTAACTCTTGTGTTGGTGGGGAGTGCCTCCACTATACTCAGGTGGTTTGGAAAAACTCAATACGCCTTGGATGTGCTAAAGTGAGGTGTAACAATGGAGGAACATTCATTGGCTGCAACTATGATCCTCCTGGCAACTATGTTGGGGAAAGACCTTACTAA 480 0.4729 MGSFSLLCVLGLVIVGHVAYAQDSPQDYLDAHNAARSEVNVPNLVWDDTVAAFAQNYANQRQGDCQLIHSGGGGRYGENLAGSSGDLSGKDAVGLWVNEKSNYDYNSNSCVGGECLHYTQVVWKNSIRLGCAKVRCNNGGTFIGCNYDPPGNYVGERPY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0273 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 159 IPR001283 -
Dod03g0273 159 CDD CAP_PR-1 25 159 - -
Dod03g0273 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Dod03g0273 159 Pfam Cysteine-rich secretory protein family 29 147 IPR014044 -
Dod03g0273 159 SMART SCP_3 23 155 IPR014044 -
Dod03g0273 159 SUPERFAMILY PR-1-like 8 159 IPR035940 -
Dod03g0273 159 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 4 159 - -
Dod03g0273 159 Gene3D CAP 23 159 IPR035940 -
Dod03g0273 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Dod03g0273 159 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Dod03g0273 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Dod03g0273 159 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0273 Dod-Chr3 2903467 2904349 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0273 K13449 - gmx:100806194 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0273 03 2903467 2904349 Dod03g0273 03 2903467 2904349 ECH