Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0272 ATGAGGCCCCCAACAACATACCATGTGATCTTAGCCATTTTCTTCTTAATGTGCTCAACCATTTCCGTAGCCCAAAACACCCCTCAAGATTTCCTCGCTGTTCACAACCAAGCCCGTGCCAAGGTTGGTGTTAGTCCACTCTCATGGAACCACACCCTCCAAGCCTATGCTCAGCACTATGCCAATGAGAGAATCCCTGACTGCAACTTGGAGCACTCTATGGGCCCTTTTGGCGAGAACCTCGCCGAGGGCTACGGCGAGATGAAGGGTTCGGATGCTGTGAAGTTCTGGCTCACTGAGCAGCCAAACTATGACTATCACTCAAACTCTTGTGTGAATGATGAGTGCCTGCATTATACTCAGATTGTGTGGCGCGATACGGCTCATCTTGGGTGTGCTAGAGCTAAGTGTAACAATGGCTGGGTCTTTGTCATTTGCAGCTATGACCCACCAGGCAACATTGAAGGCCAACGACCCTATTGA 483 0.501 MRPPTTYHVILAIFFLMCSTISVAQNTPQDFLAVHNQARAKVGVSPLSWNHTLQAYAQHYANERIPDCNLEHSMGPFGENLAEGYGEMKGSDAVKFWLTEQPNYDYHSNSCVNDECLHYTQIVWRDTAHLGCARAKCNNGWVFVICSYDPPGNIEGQRPY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0272 160 CDD CAP_PR-1 28 160 - -
Dod03g0272 160 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Dod03g0272 160 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Dod03g0272 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Dod03g0272 160 PRINTS Allergen V5/Tpx-1 family signature 47 65 IPR001283 -
Dod03g0272 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 6 160 IPR001283 -
Dod03g0272 160 Gene3D CAP 25 160 IPR035940 -
Dod03g0272 160 SMART SCP_3 26 156 IPR014044 -
Dod03g0272 160 SUPERFAMILY PR-1-like 25 160 IPR035940 -
Dod03g0272 160 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Dod03g0272 160 Pfam Cysteine-rich secretory protein family 32 148 IPR014044 -
Dod03g0272 160 PANTHER - 6 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0272 Dod-Chr3 2897020 2897869 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0272 K13449 - gmx:100527778 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0272 03 2897020 2897869 Dod03g0272 03 2897020 2897869 ECH