Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0253 ATGGCTTCCGCCGTCTTAGCCAACCGGAACGAACCTAATTGGCCGCAGCACAAAGGCGGTGGAGCGGGATTCATGGGAAAAGTACCTTTCTCAAATTCAAACCCTAACCCTAAATTCGGGAACAACAAGAAGAACCAATCTGGTTCCGATGACGCTTCCTCCATCAATCGAAGGTCCAACGAAGCCAACCATTCCCAATACGTGACGTTCAACGTCGCTTCGTACACGAAGAAGGAGCTGAACGAGCTCAAGAATCGCTTGGTATCGGAGCTCGAGCAGATTCGAAAGCTCAAGAGCCGAATCGAGTCCGGAGATTTTCAACCCCGGCAGAGCCTCAACGGTCCGCCGAAGAAATCTTCGAGCAAGAAGATTTCCGGCAACAAGCGCCCATTTCCGGTGGCGAATTCCGTTAAAGATTTGAAACGGTCGAATTCGGAGGTTGGGAACTTGATGAAAGCTTGCTCGCAGGTTCTGCAGAAGCTCATGAAGCAGAAGCACGGTTGGATCTTCAACCTTCCCGTCGACGTTGTTGGGATGGGGCTTCATGATTACCACGATATTATCAAGCAACCGATGGATCTGGGCACTGTGAAGTCGAATCTCGCCAAGAACCTGTATTCGACGCCATCGGATTTCGCCTCCGATGTGCGGTTGACGTTCAAGAACGCGTTGACGTATAACCCCCCCGGTCACGAGGTTCACACCATGGCGAACCAGTGGTTGGCAAGGTTCGAGGAGCTTTATCGGCCCGTGCACGAGAAATTCGAGGGTTGGTTGAGGCAGGATCGCGATTTCGATGAGGAATTGCAGGCCAGTTCGTGGAACCATGTTGTTGAGCCCGAGAAGGTTAAGAAGAAGGAGAATGTGATCCCTCCTCCGAAATTGCAATCAGAGCCGCTACTGCAGGCGCCGGCGAGCTCTTCGAACCCTCCTCCGATGGCACGGTCAGCGTCTCCGGTGCGGACGCCGTCCCCGATGCGAGCCCCTCCAGTGAAGCCTTTGAAGCAGCCAAAGCCTAAGGCTAAGGACCCGAATAAGAGGGAGATGAGCCTTGAGGAGAAGCACAAGTTGGGAATTGGGTTGCAGAGCTTGCCTCCTGAGAAAATGGAGCAAGTTGTGCAGATCATAAGGAAGAGGGGGAATTTGAAGCAGGATGGGGATGAGATTGAGCTTGATATTGAGGCTGTGGACACTGAAACCCTTTGGGAACTTGATCGGTTGGTGACTAATTGGAAGAAGATGATGAGCAAGATTAAGCGGCAAGCACTACTCGGCAACCTCAATAACAACAATGCGGCGTCCAACAAAGGCAATGGGGAATTGCCTAGTAGTGAGAAGGTTGAATCAGCACCAGCTGAGGTGAAGAAACCAAAGAAGGTGGAAGCTGGGGATGAGGATGTTGACATTGGTGATGAGATGCCAATGAGTGCGTTCCCCCCTGTGGAGATTGAGAAAGATAAAGAAGTTGTTGGAGGCCATGCGAGTAGTAGTTCAAGTAGCTCAAGCAGTTCAAGCAGTGATTCCTCATCGTCAAGTGACTCGGATTCGGGGAGTTCTTCAGGGAGTGATTCTGAAGCAGACAATGGGCACACATAG 1596 0.5157 MASAVLANRNEPNWPQHKGGGAGFMGKVPFSNSNPNPKFGNNKKNQSGSDDASSINRRSNEANHSQYVTFNVASYTKKELNELKNRLVSELEQIRKLKSRIESGDFQPRQSLNGPPKKSSSKKISGNKRPFPVANSVKDLKRSNSEVGNLMKACSQVLQKLMKQKHGWIFNLPVDVVGMGLHDYHDIIKQPMDLGTVKSNLAKNLYSTPSDFASDVRLTFKNALTYNPPGHEVHTMANQWLARFEELYRPVHEKFEGWLRQDRDFDEELQASSWNHVVEPEKVKKKENVIPPPKLQSEPLLQAPASSSNPPPMARSASPVRTPSPMRAPPVKPLKQPKPKAKDPNKREMSLEEKHKLGIGLQSLPPEKMEQVVQIIRKRGNLKQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKIKRQALLGNLNNNNAASNKGNGELPSSEKVESAPAEVKKPKKVEAGDEDVDIGDEMPMSAFPPVEIEKDKEVVGGHASSSSSSSSSSSSDSSSSSDSDSGSSSGSDSEADNGHT* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0253 531 MobiDBLite consensus disorder prediction 426 442 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 1 62 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 282 350 - -
Dod03g0253 531 Coils Coil 77 100 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 449 465 - -
Dod03g0253 531 Gene3D - 120 262 IPR036427 GO:0005515
Dod03g0253 531 SUPERFAMILY Bromodomain 143 254 IPR036427 GO:0005515
Dod03g0253 531 PANTHER TRANSCRIPTION FACTOR GTE2 38 528 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 426 531 - -
Dod03g0253 531 Pfam Bromodomain 154 238 IPR001487 GO:0005515
Dod03g0253 531 MobiDBLite consensus disorder prediction 300 315 - -
Dod03g0253 531 PRINTS Bromodomain signature 165 178 IPR001487 GO:0005515
Dod03g0253 531 PRINTS Bromodomain signature 215 234 IPR001487 GO:0005515
Dod03g0253 531 PRINTS Bromodomain signature 181 197 IPR001487 GO:0005515
Dod03g0253 531 PRINTS Bromodomain signature 197 215 IPR001487 GO:0005515
Dod03g0253 531 ProSiteProfiles Bromodomain profile. 162 234 IPR001487 GO:0005515
Dod03g0253 531 ProSiteProfiles NET domain profile. 339 419 IPR027353 -
Dod03g0253 531 PANTHER OSJNBA0053K19.4 PROTEIN 38 528 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 104 121 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 336 350 - -
Dod03g0253 531 Pfam Bromodomain extra-terminal - transcription regulation 348 409 IPR027353 -
Dod03g0253 531 Gene3D - 342 418 IPR038336 -
Dod03g0253 531 MobiDBLite consensus disorder prediction 101 134 - -
Dod03g0253 531 SMART bromo_6 143 253 IPR001487 GO:0005515
Dod03g0253 531 MobiDBLite consensus disorder prediction 492 531 - -
Dod03g0253 531 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0253 Dod-Chr3 2690060 2691845 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0253 - - gmx:100802622 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0253 03 2690060 2691845 Dod03g0253 03 2690060 2691845 ECH