Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g3726 | ATGGACCCATCCTCGATCCCTCCTCCTCCTCCTGCAGCGCCGGTGGCCACCAACACGCTCCCCATGCCCACCGTCCCCGCCGCCGTCCCCTTCCCGCCGGAGCCCAACAACCACCCTCCCCCCAACCCCAATCCCAATCCCGCTCCCGCTCCCAGCCACCCACCTTACGCCGAGATGATATACACGGCAATCGAGGCACTGAAGGAGAAGGACGGGTCGAGCAAGAGAGCAATAGCGAAGTACATAGAGGAAGTGTACAAGGACCAGCTCCCACCCACTCACTCAGCCTTGCTGACTCACCACCTCAACCGCCTCAAGAACAACGGCATGCTCCACATGGTCAAGAAATCCTACAAGCTCCCTAGATCTGCTCCCACCATCGCCTCCCCCTCTGCTTCCCCCAGGCCCAGGGGACGACCCCGCAAGGCCCAGCCCCAGGCCCAACCCCAGCTCAATCAGCCTCAGCCGCCCGCAAATGTTTCCGTCCCGCACCAGCAGAATGCCGAGCCCGTCTGGGCCGCGCTTGGGCTTGCGGATGAGCCCGCTCCCCACCCTGGCTCCGAGGTCAAGAGAAGACCTGGCCGTCCCAAGAAGAACAACGGGCCTGGGGGAACAACTCCCCAGTCTGTCCCGGCTGTTGCTACGCCGGGCCGGAGAGGGCGTCCTCCGGGCTCCAAGTCAAAGAAGCGTCTCGGCCGTCCTCCGAAGTCTGACGCCGCTGTCGCTGCTGCGGCCGCCTCTGTCGGCCCCAAGAGGCGCCCGGGCCGACCGCCCAAGAGCCAGCAGCAGGCGACTCAGGTCAATTTCGCCGCAGCTGATCCTGCCGCTGTGCCTGCATTGCCGGCGCCGGGGGGCGTGCCTGCCTCCGGGGATGTTGCCGTGGTTGGGGCTCCGAGGCCCAGAGGACGGCCCAAGAGGTATGCTGAAGAGTCCGCGTTGGCTGCTGCTGGCCGCGGGAGGGGCAGGGGCCGTGGCCGTGGACGTGGTCGTGGCGGCGGTGTTGGACGTGGACGAGGACGCGGGCGCGGCCGTGGCGGTTTGTTGGCGCAGCCCAGGAGTTCTATCGGGAGGCCCGTGGGCCGCCCGAAGAAGGGAACAACTTCTGCTAGTACTTTGCAAAATTTTGGTAATGAAGATCTCAGGAGGAAACTTGAACACTTTCAATCAAAAGTCAGGGAATCTCTTGCTGTGCTGAAGCCTCATTTTAATCATGAAAGTCCTGTCACCGCACTTGCCGCTATTCAAGAGTTGGAAGAACTGGGAACTATGGACCTCAATGCACCACTAAGGGATGAAACTGTTGCACAGCCACAGCAGCTGCCACCGCAGCAGCCGCTGCCGCAACAGCTACCAGTGCAGCAGCCGCCTCCACCACCACAACCGCAGCAGCTGCCACCACAGCAACATGTGTTTCCGCAGCAATTCCCCCAGTTTAATCTGCCACAGTACCAGCACCAGCCCCAGCAGTACCAGCAGCAGCCCCAGCAGTACCAGCAGCCACCACAGCAGCAGCAACTGTTCCATCCGTAG | 1530 | 0.6294 | MDPSSIPPPPPAAPVATNTLPMPTVPAAVPFPPEPNNHPPPNPNPNPAPAPSHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEEVYKDQLPPTHSALLTHHLNRLKNNGMLHMVKKSYKLPRSAPTIASPSASPRPRGRPRKAQPQAQPQLNQPQPPANVSVPHQQNAEPVWAALGLADEPAPHPGSEVKRRPGRPKKNNGPGGTTPQSVPAVATPGRRGRPPGSKSKKRLGRPPKSDAAVAAAAASVGPKRRPGRPPKSQQQATQVNFAAADPAAVPALPAPGGVPASGDVAVVGAPRPRGRPKRYAEESALAAAGRGRGRGRGRGRGRGGGVGRGRGRGRGRGGLLAQPRSSIGRPVGRPKKGTTSASTLQNFGNEDLRRKLEHFQSKVRESLAVLKPHFNHESPVTALAAIQELEELGTMDLNAPLRDETVAQPQQLPPQQPLPQQLPVQQPPPPPQPQQLPPQQHVFPQQFPQFNLPQYQHQPQQYQQQPQQYQQPPQQQQLFHP* | 510 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 116 | 378 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 25 | 54 | - | - | |
| Dod02g3726 | 509 | SUPERFAMILY | "Winged helix" DNA-binding domain | 47 | 125 | IPR036390 | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 321 | 337 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 467 | 509 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 423 | 509 | - | - | |
| Dod02g3726 | 509 | PRINTS | Histone H5 signature | 39 | 60 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
| Dod02g3726 | 509 | PRINTS | Histone H5 signature | 186 | 205 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
| Dod02g3726 | 509 | PRINTS | Histone H5 signature | 66 | 83 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
| Dod02g3726 | 509 | PANTHER | HISTONE H1 | 32 | 328 | - | - | |
| Dod02g3726 | 509 | PANTHER | HISTONE H1 | 334 | 438 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 440 | 466 | - | - | |
| Dod02g3726 | 509 | CDD | H15 | 52 | 132 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Dod02g3726 | 509 | Gene3D | - | 49 | 130 | IPR036388 | - | |
| Dod02g3726 | 509 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 52 | 122 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Dod02g3726 | 509 | PRINTS | AT-hook-like domain signature | 249 | 260 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | PRINTS | AT-hook-like domain signature | 134 | 144 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | PRINTS | AT-hook-like domain signature | 296 | 306 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 356 | 368 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 298 | 310 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 134 | 146 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 190 | 202 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 229 | 240 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 216 | 228 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | SMART | AT_hook_2 | 251 | 263 | IPR017956 | GO:0003677 | |
| Dod02g3726 | 509 | PANTHER | HISTONE H1-LIKE | 334 | 438 | - | - | |
| Dod02g3726 | 509 | PANTHER | HISTONE H1-LIKE | 32 | 328 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Dod02g3726 | 509 | MobiDBLite | consensus disorder prediction | 145 | 166 | - | - | |
| Dod02g3726 | 509 | SMART | h15plus2 | 50 | 117 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Dod02g3726 | 509 | Pfam | linker histone H1 and H5 family | 53 | 115 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g3726 | Dod-Chr2 | 76039044 | 76044250 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g3726 | - | - | gmx:100788215 | 326.635 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod02g3726 | 02 | 76039044 | 76044250 | Dod02g3726 | 02 | 76039044 | 76044250 | ECH |