Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3655 ATGATTGAACCAAAAGAAAATAAGCAAAATTTGCCAATGCCACATCTGACCAACCACACAGGCCCTAACGTAACCCTGCGTTGCCACATTTGCCCTCACCACTTCAATCGCATTCCCCATTCCTCATTCCTCATTCATCATTCCTCGTTCCTCATTCCTCATTCCTCATTCCATCCTCTCTCTGATCAAAGGCCGCTATTGACGACCGATACAAGTCGCTCACCGAAAACAGAAACAGCAACATCCTCGTTTCGCACAGAACGATGCTGTTGTTGTTGTTGTTGGGTGTCTAAAAAGGAGACAGTGAAAAAAAAAATGAGGTCTTCTTCTTCGGACACGATCAACATCGCTGCCAGCACTCAGAGACTCGATGTCGATAATCGTATCGCCCTGCGATTCTACTATCGGATCGCTGATAACATCCTCAGACAGGCTGATATCTTTCGGGCAGAGAAGAATATTATTGACTTATATGTCATGCTCCTAAGATTTTCTAGTTTGGTGTCTGAAACTATACCCCGCCACCGAGATTATAGACCAGCTCCACAAAGCAAGAAAGAATCATTGAAAAAGAAATTGTTAATTTCCTTGAATGAACTGGAGAAGTTGAAACCGCTGGTGCAACAGAAGATCAATGAGCTGAACAGCAGACGTGCTTACCAACAAAATGGGCGGGGAAACTTTCATTCAAATAATTCAATGGATCTTTCTCCAGTGAAAAAGCAAACTTTGGGTAGTTATGGCCAAATGAAGACAGTCAGACCGACTGCTGGGGAGTTTGGTTATCAAGGATCAAGGGGCCAACAATTCTCTTATGTCAGGCCTGTAGAACAGCATTTCCAAAGACTATCTCTAACTCTTCCACTCCCAAAGGAGGAAACACTCTCTAGACATTCTATCTTTGGTCCTAATGGGCTAAATGGGCAGTGGCGGCCACCTACAAGTGATAAAGGGGTCAGGTATCCAACCATCACAGATCTATCTCCAGTTGAAATTCCAAGCCTACAACATTCTTCGGAAGATGGATCTCTTAATAAAAATGACGATAGCATCAACGAACACACTAAACCAGATTCAGATTCAACTCTTATCCAGAGTGAGGATTGCAAGGCTCAGCAAGCTGAGGAACCTCCTTCTCTGATCTCTTTTGAAGCAACAGAAACCCCTGCTCAAATAGAGGTTATCAGACAGCCTTCTCCTCCACCTGTACTTGCTGAAGTACAAGATTTGATCCCTGCAGTGTCACCTCATGTTAACGAGGCTGGTTGTGAGACAGCAATTCCGTCATCAGATAGTTGTGTTCATGCTGAGTTGCCTATGCAACTGCACATTTCAACTGCCTTGATGGCAAATTTTATGAAGCTTGCCAAGTCGAATACTGACAAAAATTTAGAGACTTGTGGCGTCCTTGCTGGTTTGCTTAAAAACAGAAAATTTTATATTACTGCTCTTATAATCCCAAAGCAAGAGTCAACATCAGATTCTTGTCAGACTACAAATGAGGAGGAAATATTTGAAGTGCAGGATAAACGATCTCTTTTCCCCCTTGGATGGATACATACACATCCTACTCAATCTTGTTTCATGTCATCAATTGATCTGCACACTCACTACTCGTATCAGATTATGCTGCCAGAATCTGTTGCAATAGTCATGGCACCAAAAGATAGTTCAAGAAACCATGGCATTTTTCGGTTGACATCACCAGGTGGAATGTCTGTCATCAAACAATGCCAGCAACGTGGCTTTCATCCACATAGTCCGCCTCCAGATGGTGGTCCTATTTACAAGACTTGTACTGATGTTTACATGAACCCAGATTTAAAATTTGATGTCATTGATCTTCGGTGA 1851 0.4273 MIEPKENKQNLPMPHLTNHTGPNVTLRCHICPHHFNRIPHSSFLIHHSSFLIPHSSFHPLSDQRPLLTTDTSRSPKTETATSSFRTERCCCCCCWVSKKETVKKKMRSSSSDTINIAASTQRLDVDNRIALRFYYRIADNILRQADIFRAEKNIIDLYVMLLRFSSLVSETIPRHRDYRPAPQSKKESLKKKLLISLNELEKLKPLVQQKINELNSRRAYQQNGRGNFHSNNSMDLSPVKKQTLGSYGQMKTVRPTAGEFGYQGSRGQQFSYVRPVEQHFQRLSLTLPLPKEETLSRHSIFGPNGLNGQWRPPTSDKGVRYPTITDLSPVEIPSLQHSSEDGSLNKNDDSINEHTKPDSDSTLIQSEDCKAQQAEEPPSLISFEATETPAQIEVIRQPSPPPVLAEVQDLIPAVSPHVNEAGCETAIPSSDSCVHAELPMQLHISTALMANFMKLAKSNTDKNLETCGVLAGLLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPESVAIVMAPKDSSRNHGIFRLTSPGGMSVIKQCQQRGFHPHSPPPDGGPIYKTCTDVYMNPDLKFDVIDLR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3655 616 SUPERFAMILY JAB1/MPN domain 440 572 - -
Dod02g3655 616 CDD MPN_AMSH_like 441 616 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Dod02g3655 616 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 106 616 - -
Dod02g3655 616 ProSiteProfiles MPN domain profile. 442 572 IPR037518 -
Dod02g3655 616 Gene3D Cytidine Deaminase, domain 2 429 616 - -
Dod02g3655 616 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 441 545 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod02g3655 616 Gene3D - 103 233 - -
Dod02g3655 616 MobiDBLite consensus disorder prediction 342 363 - -
Dod02g3655 616 PANTHER AMSH-LIKE PROTEASE 106 616 - -
Dod02g3655 616 Pfam USP8 dimerisation domain 115 205 IPR015063 -
Dod02g3655 616 Coils Coil 197 217 - -
Dod02g3655 616 MobiDBLite consensus disorder prediction 297 363 - -
Dod02g3655 616 SMART pad1_6 441 569 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3655 Dod-Chr2 74821823 74828233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3655 K11866 - gmx:100804754 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3655 02 74821823 74828233 Dod02g3655 02 74821823 74828233 ECH