Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3648 ATGAGTAGAAGGAAAAGGGGGGTTTTGGTCAACGTGGAAGAGGCTGCAGTGGACTTCTTCAACCACGTCTTGCAGGAGAAGCCCCATGTTTGGCTCTTCATTCCTCTGGTTTTGGTTGCTTGGGCCATTGAGAGATGGCTCTTCTCTTTCTCCAACTGGATTCCTCTGGTACTTGCTGCCTGGACAGCTATACAGTATGGAAGATATCAACGAAAACTACTTGTGGAGGACTTGGATAAGAAATGGAAGCGAATCATACTAAACACTTCGCCTATCACACCATTGGAGCATTGTGAGTGGCTGAATAAGCTGCTGAGTGAAATCTGGTCCAGCTATTTCAACCCAAAATTCTCAATAAGGTTATCAGCTATAGTTGAGAAACGTTTAAAGCTCCGGAAGCCAAGACTTATAGAAAGAGTTGAGCTGCTGGAGTTTTCACTGGGATCGTGCCCTCCTAGTTTGGGTCTTCAAGGGATGCGATGGTTGACTATTGGTGACCAGCGAGTCCTGCAACTTGGTTTTGATTGGGACACAAATGAAATGAGCATTTTGCTGCTTGCAAAGCTCGCAAAGCCGTTGATTGGAACTGCTCGAATTGTGATTAACAGTCTTCATATCAAGGGCGATCTTATCGCCACACCAATTCTAGATGGAAAAGCACTTCTGTATTCATTTGTGTCGACGCCTGAGGTGAGAATAGGAGTTGCCTTTGGAAGCGGTGCAAGCCAGTCACTTCCTGCGACTGAATGGCCTGGTGTTTCTTCTTGGCTGGAAAAGCTTTTTACTGACACCTTGGTTAAGACTATGGTGGAACCCCGGCGCCGTTGTTTTTCTTTGCCTGCGGTTGATTTAAGGAAAAAGGCTGTTGGAGGCATTATATACATTAGAGTGATTTCAGCTAGTAAACTTTCAAGGAGTTGCTTCAAGGGGTCATCTAGGAGGCAACAAAATGGTACAAACAATGGTTTTTCAGAAGAGAATTTTGATGACAAGGACCTGCAAACATTTGTAGAGGTAGAAGCTGAGGAATTAATTAGGAGAACAGATGTGAGACTGGGGTCAACCCCTAGATGGGATGCACCATTCAATATGGTTTTACATGACAGTGCTGGGACCATTCGTTTCAATCTTTATGAGTCTTATCCCAGCAATGTGAGGTGTGACTATCTAGCAAGCTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCAACAATACTGTGGGCAATAGGACCTGATTATGGGGTCATAGCAAAGCAAGCACAATCTTGTGGAGATGAAATTGAAATGGTTGTCCCATTTGAGGGGACCAACTCTGGCGAGTTGAAGGTGAGCATTGTAGTAAAAGAGTGGCAATATGCTGATGGTTCTCATAGCTTGAACAATCTCCGGGTCAGCTCTCAACAATCGCTTAATGGATCATCAAATCTTCAGTTAAGAACTGGAAGGAAGCTTAACATCACTGTTATGGAAGGAAGGGATCTAACAAAAGACAAGCCTGGAAAATTTGACCCATACATTAAATTACAGTACGGAAAGGTTGTCCAGAGAACAAAGACTTCTCATACTCCGAATCCTGTCTGGAATCAGACATTTGAATTTGATGAGATTGGTGGTGGTGAATACTTAAAAGTGAAAGCCTTCACTGAAGAAATTTTTGGAGATGAAAACATTGGTAGTGCAAATGTAAATTTGGAAGGACTGGCTGGTGGCTCGGTCAGGGACGTATGGATCCCACTTGAACGAGTGCGCTCTGGAGAATTAAGACTTCAAATAGAGGCGGTTAGGGTGGATGACCAAGAAGGATCAAGGGGTTCGGCTCCTAGCTCGAGCAATGGTTGGATAGAACTTGTTCTGATTGAAGGAAGGGATCTTGTTGCTGCCGATCTTCGAGGAACTAGTGATCCATATGTGAGGGTACACTATGGAAACTTCAAGAAAAAGACAAAGGTTATATACAGAACTCTTAACCCTCGTTGGAACCAGACCCTAGATTTCCCTGATGATGGAAGTCCCTTGGCACTTTATGTGAAGGACCACAATGCATTGCTCCCCACATCAAGCATAGGTGAGTGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAGACTGCAGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAGATTCACATCCAAATCACTAGAAAAGTTCCGGAGGTGCAAAAGAGAAATAGTCTCGACTCTGAACCTTCCTTGAGCAAATTACACGAAATTCCTACCCAGATAAAACAGATGATGATCAAGTTCCGGTCTTTAATAGAGGATGGAAACCTTGAAGGGCTATCCACCACTTTGAGTGAGCTAGAAACTCTAGAGGATACACAGGAAGGGTACATACTCCAGCTGGAGACTGAGCAAATGCTTCTCCTCACCAAAATAAGGGAACTAGGCCAAGAGATGATTAATTCTTCTCCTTCCCTTAGCAGAAGAAGATCTTCTTCCTCAAGTGGAAGTTGA 2487 0.4395 MSRRKRGVLVNVEEAAVDFFNHVLQEKPHVWLFIPLVLVAWAIERWLFSFSNWIPLVLAAWTAIQYGRYQRKLLVEDLDKKWKRIILNTSPITPLEHCEWLNKLLSEIWSSYFNPKFSIRLSAIVEKRLKLRKPRLIERVELLEFSLGSCPPSLGLQGMRWLTIGDQRVLQLGFDWDTNEMSILLLAKLAKPLIGTARIVINSLHIKGDLIATPILDGKALLYSFVSTPEVRIGVAFGSGASQSLPATEWPGVSSWLEKLFTDTLVKTMVEPRRRCFSLPAVDLRKKAVGGIIYIRVISASKLSRSCFKGSSRRQQNGTNNGFSEENFDDKDLQTFVEVEAEELIRRTDVRLGSTPRWDAPFNMVLHDSAGTIRFNLYESYPSNVRCDYLASCEIKMRHVEDDSTILWAIGPDYGVIAKQAQSCGDEIEMVVPFEGTNSGELKVSIVVKEWQYADGSHSLNNLRVSSQQSLNGSSNLQLRTGRKLNITVMEGRDLTKDKPGKFDPYIKLQYGKVVQRTKTSHTPNPVWNQTFEFDEIGGGEYLKVKAFTEEIFGDENIGSANVNLEGLAGGSVRDVWIPLERVRSGELRLQIEAVRVDDQEGSRGSAPSSSNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGNFKKKTKVIYRTLNPRWNQTLDFPDDGSPLALYVKDHNALLPTSSIGECVVEYQRLPPNQTADKWIPLQGVKRGEIHIQITRKVPEVQKRNSLDSEPSLSKLHEIPTQIKQMMIKFRSLIEDGNLEGLSTTLSELETLEDTQEGYILQLETEQMLLLTKIRELGQEMINSSPSLSRRRSSSSSGS* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3648 828 ProSiteProfiles C2 domain profile. 465 578 IPR000008 -
Dod02g3648 828 PANTHER PLANT SYNAPTOTAGMIN 1 819 - -
Dod02g3648 828 Pfam C2 domain 615 711 IPR000008 -
Dod02g3648 828 Pfam C2 domain 292 403 IPR000008 -
Dod02g3648 828 Pfam C2 domain 484 580 IPR000008 -
Dod02g3648 828 Gene3D C2 domain 482 599 IPR035892 -
Dod02g3648 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 592 IPR035892 -
Dod02g3648 828 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 94 280 IPR031468 GO:0008289
Dod02g3648 828 CDD C2 485 580 - -
Dod02g3648 828 PANTHER OS01G0128800 PROTEIN 1 819 - -
Dod02g3648 828 ProSiteProfiles C2 domain profile. 596 709 IPR000008 -
Dod02g3648 828 Gene3D C2 domain 600 726 IPR035892 -
Dod02g3648 828 SMART C2_3c 614 708 IPR000008 -
Dod02g3648 828 SMART C2_3c 292 409 IPR000008 -
Dod02g3648 828 SMART C2_3c 484 577 IPR000008 -
Dod02g3648 828 CDD C2 615 711 - -
Dod02g3648 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 610 724 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3648 Dod-Chr2 74682366 74690224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3648 363 746 Lipid Metabolism Gene Families AT3G61300 24.476 2.30e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3648 - - gmx:100789237 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3648 02 74682366 74690224 Dod02g3648 02 74682366 74690224 ECH
Dod04g3059 04 54344089 54345816 Dod02g3648 02 74682366 74690224 PCT