Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3625 ATGGAATCTGATCAACCATCACCACAGATCAAAGGTGTTGTTATAATCTCTCTTCCACCCCCAGATAACCCTTCTTTGGGAAAAACCATCACTGCTTTTACTTTCTCTAACCCTTCTTCGCCTCTTCCTCCATCACAAGGTTCTATTCAACAACAAACACAACACAATTCCCAGGACGGTGACAATCACCATGCACTTCATTCCCACCCATCATCAAACCCTCAGCTTCAGTTTTCTTCATTCAGGAGGCTCTTCCTTGGCACCCCAATAAAGCTCTTTGCTTTCTTTGGTATCATACTTTTTGCTCTTTTTCTTTATGGTTCTGTCTCTTCAAACACACTGCAGGAACTGCGTGGTCTTAGGAATCAAGATGATGATGGACTAAGTTCCTTTCTGTTCCCTTTGTTCCCCAAATTTGGTATCCATGGGCAGAAGGATGTGAGGCTAAGACTGGGGAAGCTTGTTGATGTTCAAAGAGAGAGTTTTGTGACACAAAGAAAAGCTGATGCTGGAGTTTCATCCGTTAGTTCATCCGCTGTTTTTCCAGTCAGTGGCAACATTTATCCAGATGGGTTGTATTTCACATATCTACGTGTTGGAAATCCTCCAAAGCGTTATTTTCTTGACGTAGATACAGGGAGTGACTTGACTTGGATCCAGTGTGATGCTCCATGCAGAAGTTGTGCAAAGGGGGCACATGTCCTGTACAAGCCAACAAGATCCAATATAGTGCCATCCGGGGACTCCCTCTGCTTGGAAGTTCAGAAGAATCAGAGGAATGGATATCATGGAAGTTTCCAACAGTGTGACTATGAGATTCAATATGCAGATCATAGTTCCTCCATGGGGGTTCTCATTAGAGATGAGGTTCATCTTATGCTTACAAATGGATCCAAAACCAATATAAATTTTGTTTTCGGGTGTGGATATGATCAAGAGGGCTTACTTTTGAACACATTGGCAAAAACAGATGGAATCATGGGACTGAGCAGGGCGAAAGTGAGCCTACCTTTCCAGTTGTCAAGTAAAGGGCTTATTAAGAATGTGGTTGGTCATTGCCTAAGCAATGATGGAGTTGGTGGTGGATACATGTTTTTGGGTGATGATTTTGTGCCATATTGGGGTATGACTTGGGCTCCTATGACCAATACCCATACTACAGATTTATATCAAACTGAGGTTCTTGGAATAAATTATGGGTATAGCCCACTCAGTTTTGATGGCAACAGCAAAGTAGGAAAGGTGATCTTTGACAGTGGCAGTTCTTACACGTATTTTACCAAAGAGGCATACTCGGATCTTGTTGCTTCCCTTAAAGAAGTTTCTGGGTTGGGGCTCACTCAAGATGAGTCAGATACAACTTTGCCCATTTGCTGGAAAGCTGATTACCCTATCAGATCTGTCAAAGATGTCAAGAATTTCTTCAGTCCCTTGACTCTTCGGTTTGGAAGCAAGTGGTGGATTGTGTCCAGAGTGATTCAGATACCTCCAGAGGGTTACTTGATTATTAGTAACAAAGGCAATGTGTGCTTGGCTATCCTTGATGGTAGCAATGTACATGATGGATCCTCAATTATACTTGGAGACATTTCATTGCGAGGATATTTGGTTGTGTATGACAATGAGAACCAAAAAATTGGCTGGGAGCGAGCAGAGTGTGCCATGCCAAGAAGATTGAGGAAGAGTCACAATCCCTTAACTGATAGCATGTTATGA 1716 0.4254 MESDQPSPQIKGVVIISLPPPDNPSLGKTITAFTFSNPSSPLPPSQGSIQQQTQHNSQDGDNHHALHSHPSSNPQLQFSSFRRLFLGTPIKLFAFFGIILFALFLYGSVSSNTLQELRGLRNQDDDGLSSFLFPLFPKFGIHGQKDVRLRLGKLVDVQRESFVTQRKADAGVSSVSSSAVFPVSGNIYPDGLYFTYLRVGNPPKRYFLDVDTGSDLTWIQCDAPCRSCAKGAHVLYKPTRSNIVPSGDSLCLEVQKNQRNGYHGSFQQCDYEIQYADHSSSMGVLIRDEVHLMLTNGSKTNINFVFGCGYDQEGLLLNTLAKTDGIMGLSRAKVSLPFQLSSKGLIKNVVGHCLSNDGVGGGYMFLGDDFVPYWGMTWAPMTNTHTTDLYQTEVLGINYGYSPLSFDGNSKVGKVIFDSGSSYTYFTKEAYSDLVASLKEVSGLGLTQDESDTTLPICWKADYPIRSVKDVKNFFSPLTLRFGSKWWIVSRVIQIPPEGYLIISNKGNVCLAILDGSNVHDGSSIILGDISLRGYLVVYDNENQKIGWERAECAMPRRLRKSHNPLTDSML* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3625 571 MobiDBLite consensus disorder prediction 1 73 - -
Dod02g3625 571 PRINTS Pepsin (A1) aspartic protease family signature 415 426 IPR001461 GO:0004190|GO:0006508
Dod02g3625 571 PRINTS Pepsin (A1) aspartic protease family signature 525 540 IPR001461 GO:0004190|GO:0006508
Dod02g3625 571 PRINTS Pepsin (A1) aspartic protease family signature 199 219 IPR001461 GO:0004190|GO:0006508
Dod02g3625 571 PANTHER ASPARTYL PROTEASES 17 557 IPR001461 GO:0004190|GO:0006508
Dod02g3625 571 SUPERFAMILY Acid proteases 184 554 IPR021109 -
Dod02g3625 571 Pfam Xylanase inhibitor C-terminal 402 549 IPR032799 -
Dod02g3625 571 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 415 426 IPR001969 GO:0004190|GO:0006508
Dod02g3625 571 ProSiteProfiles Peptidase family A1 domain profile. 193 549 IPR033121 -
Dod02g3625 571 MobiDBLite consensus disorder prediction 27 59 - -
Dod02g3625 571 PANTHER ASPARTYL PROTEASE APCB1 17 557 - -
Dod02g3625 571 Gene3D Acid Proteases 167 368 IPR021109 -
Dod02g3625 571 Pfam Xylanase inhibitor N-terminal 193 368 IPR032861 -
Dod02g3625 571 Gene3D Acid Proteases 374 555 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3625 Dod-Chr2 74402805 74407576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3625 175 553 Miscellaneous Gene Families AT1G77480 45.431 1.71e-110 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3625 - - gmx:100783933 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3625 02 74402805 74407576 Dod02g3625 02 74402805 74407576 ECH