Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3618 ATGGCTCTTAATCTGAACCCACACTCCCTCCTCTTCCTTCTCCTTCCCGTAGCACTCTCCCTGACCCTCCCTCTTTCATCCGCCTCTCGGACCTCACCACCGTCTGAGTTCACCACCACACTTCTCGACATCTCCTCCTCCCTCCACCAAGCCCACCAAGTCCTCTCCTTCAACCCCAACAACCTTCTAGAATCTTCTTACCAACAAGAAACCCAGCTCACTTCATCATTCTCAGTTCACCTCCACCCAAGAGACACCCTCCTCACCACAAAGCACAAAGACTACAAGTCCTTAGTCCTCTCCCGACTCGCCCGCGACTCAGCCCGAGTCAACTCGCTCAACCTTAAACTCCACTTCGCCCTCAACAACATCTCAAAATCGGACCTCCACCCGGCCCAGGCCCAGGCCCAAACTGAATTCCAACCCGAAGACCTCTCCACCCCGGTCTCCTCCGGGACCGGCATGGGCTCGGGCGAGTACTTCTCCCGGGTAGGAGTGGGCCAGCCCGCAAAGCCCTTCTACATGGTCCTCGACACAGGAAGCGACGTAAACTGGCTCCAGTGCAAGCCCTGCTCCGAATGCTACCAACAATCCGACCCCATTTTCGACCCGACACTCTCCACCTCGTACTACCCCTTGACCTGCGACGCACAGCAGTGTCAGGCTTTAGACGTGTCCGCATGCCGCAACAGCAAGTGCCTCTACCAAGTCTCGTACGGTGACGGCTCTTTCACCGTTGGTGAATACGTAACCGAAACGGTGTCGTTTGGTAACTCCGGGTCAGTTAATAAGGTCGCTATGGGCTGCGGCCATGATAACGAGGGCCTTTTTGTTGCCGCAGCGGGCCTTCTTGGGCTTGGTCGTGGGCCTTTGTCACTTACTTCTCAGATCAAAGCGGCGTCGTTTTCGTATTGTCTCGTGGATAGGGATTCAGCTAGGAGTTCCACGCTCGAGTTCAACTCGCCGCGACCCGGTGACTCGGTCACCGCGACTCTGCTAAGGAACCAGAAGATGGGGACGTTTTACTACGTTGAGCTAGCCGGAGTCAGTGTCGGCGGGCACATGTTGGCGATCCCGCCGTCGACGTTCGCGATGGACAGCTCCGGCGAGGGAGGGATCATTGTTGACTCGGGGACCGCCGTGACTCGGTTGGTGACTCAGGCGTACAACTCGGTACGCGACGCGTTCAGGAGCATGACTCGGAACCTTAGGTCTGCGAACGGGTTTGCGCTCTTCGACACGTGCTACGACTTGTCGTCTTTGAGGTCAGTGAGCGTGCCGACTGTGTCGTTTCACTTTAGTGGAGGGAAGATGTGGCAGCTTCCGGCGAAGAATTACTTGATCCCGGTTGATAATTCGGGCACTTTTTGCTTCGCGTTTGCCCCTACGACGTCGTCTTTGTCCATCATAGGCAATGTGCAGCAACAGGGGACACGTGTCAGCTTCGATCTTGGCAACTCTGTAGTGGGATTCTCGCCCAATAAGTGCTAG 1491 0.5634 MALNLNPHSLLFLLLPVALSLTLPLSSASRTSPPSEFTTTLLDISSSLHQAHQVLSFNPNNLLESSYQQETQLTSSFSVHLHPRDTLLTTKHKDYKSLVLSRLARDSARVNSLNLKLHFALNNISKSDLHPAQAQAQTEFQPEDLSTPVSSGTGMGSGEYFSRVGVGQPAKPFYMVLDTGSDVNWLQCKPCSECYQQSDPIFDPTLSTSYYPLTCDAQQCQALDVSACRNSKCLYQVSYGDGSFTVGEYVTETVSFGNSGSVNKVAMGCGHDNEGLFVAAAGLLGLGRGPLSLTSQIKAASFSYCLVDRDSARSSTLEFNSPRPGDSVTATLLRNQKMGTFYYVELAGVSVGGHMLAIPPSTFAMDSSGEGGIIVDSGTAVTRLVTQAYNSVRDAFRSMTRNLRSANGFALFDTCYDLSSLRSVSVPTVSFHFSGGKMWQLPAKNYLIPVDNSGTFCFAFAPTTSSLSIIGNVQQQGTRVSFDLGNSVVGFSPNKC* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3618 496 Gene3D Acid Proteases 323 496 IPR021109 -
Dod02g3618 496 ProSiteProfiles Peptidase family A1 domain profile. 160 492 IPR033121 -
Dod02g3618 496 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 175 186 IPR001969 GO:0004190|GO:0006508
Dod02g3618 496 CDD cnd41_like 159 496 IPR033873 -
Dod02g3618 496 Pfam Xylanase inhibitor C-terminal 342 492 IPR032799 -
Dod02g3618 496 Pfam Xylanase inhibitor N-terminal 160 319 IPR032861 -
Dod02g3618 496 Gene3D Acid Proteases 132 319 IPR021109 -
Dod02g3618 496 MobiDBLite consensus disorder prediction 132 152 - -
Dod02g3618 496 SUPERFAMILY Acid proteases 154 496 IPR021109 -
Dod02g3618 496 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 22 496 - -
Dod02g3618 496 PANTHER ASPARTYL PROTEASES 22 496 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3618 Dod-Chr2 74139669 74142068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3618 136 496 Miscellaneous Gene Families AT1G77480 27.340 2.07e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3618 K22683 - gmx:100784849 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3618 02 74139669 74142068 Dod02g3618 02 74139669 74142068 ECH