Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3186 ATGAGGCCACAACCAACGGAGTTGGTGATGGTGCCACTGCTCTTGCTTCTTCTTGCTGGTTTTCCAACCGAGGCAAAAGGGTATCTGATACCACCATATGTGGATCGTCCTGGCAATCTTTTGGCTGATCTGTGGTCAGATCGCTTGCCCGATCCATTTCGCGTGCTAGAGGGAATCCCGGTTGAGCTTGATAAATATGAGCCAGCCATGGCTCTGTCATCTGCAAGAGTAGATTGGAAGGAGACAACAGAGGGGCATGTTATAATGCTGGATGTTCCGGGGCTGAAGAAAGATGAGATCAAGATAGAAGTGGAGGAGAACCGGGTTTTGAAAGTGAGTGGGGAGAGGAAGAAGGAGGAGGAGAAGAAAGGGGATCACTGGCACAGAGTTGAGAGATCATATGGTAAGTTTTGGAGGCAGTTTAGGTTGCCAGAAAATGTAAACTTGGATTCTGTCAGGGCTAAGCTGGAGGATGGAGTGCTTACTTTGACACTGGACAAGTTGGCACCTGATCAGATCAAGGGTCCAAGGGTGGTGAGTATTGCTGGGAACAGCGAGCAGCCAGCACAGATCAAGGTCAATGAGACCAAGCAGGAGCTGTGA 603 0.4959 MRPQPTELVMVPLLLLLLAGFPTEAKGYLIPPYVDRPGNLLADLWSDRLPDPFRVLEGIPVELDKYEPAMALSSARVDWKETTEGHVIMLDVPGLKKDEIKIEVEENRVLKVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPENVNLDSVRAKLEDGVLTLTLDKLAPDQIKGPRVVSIAGNSEQPAQIKVNETKQEL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3186 200 Pfam Hsp20/alpha crystallin family 78 181 IPR002068 -
Dod02g3186 200 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 190 - -
Dod02g3186 200 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 68 184 IPR002068 -
Dod02g3186 200 Gene3D - 41 183 IPR008978 -
Dod02g3186 200 Coils Coil 102 122 - -
Dod02g3186 200 ProSiteProfiles CS domain profile. 72 179 IPR007052 -
Dod02g3186 200 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 13 190 - -
Dod02g3186 200 CDD ACD_ScHsp26_like 76 167 - -
Dod02g3186 200 SUPERFAMILY HSP20-like chaperones 68 177 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3186 Dod-Chr2 66815205 66816481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3186 K13993 - gmx:100500319 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3186 02 66815205 66816481 Dod06g1494 06 20012032 20013025 PCT