Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3166 ATGGCTTCAATTCCTACTCTTTCTTCTTCTTCTTCTTCTTCTCTACCCTCAATCTCTCCTCATGCTTCAAACCCCAACAACAGCAGCAGCAGCAACAACCAGCTACCCTTCACCTTCACTCTCCCTCTCACCTCTCTCTTCGGAACCAGGATTACCCTTCAACGCCCCTCTCCAATCCCTCCTTTTCCCTCCACCAACTGCCGCACCCGTGCCACCTCTGCAACGGTGTCGTTTAGCCTCCCCACCACGAAACCCGACCCGGGTACACTCGACAAAACCCCGAAGTGGTCAGCGAGGTCTATAAAGTCTTTTGCAATGGCGGAATTGGAAGCGAGGAAGATCAAGTATCCAAACACAGGAACCGAGGCTCTTCTCATGGGAATTTTGGTAGAAGGAACAAGCAAAGCTGCAAAATTCTTAAGAGCTAATGGAATTACACTTTTCAAAGTACGCGAAGAAATAGTAGAGCTACTTGGGAAATCAGACATGTATTTCTTTAGCCCTGAGCACCCTCCATTGACTGAACCAGCTCAGAAAGCCCTTGATTGGGCAGTTGATGAGAAATTGAAGTCAGGTGAAGGAGGGGAAATAACCGTGACCCATTTACTTCTAGGAATTTGGGCACAAGAAGGATCAGCAGGTCGCCAGATCTTGGCTTCTTTAGGTTTCAATGATGAAAAAGCTAAAGAACTTGCTAAAGAAATTAATGGAGATGTTGATTTGAGCTTTAAGAAGCAAGCTTAG 744 0.4651 MASIPTLSSSSSSSLPSISPHASNPNNSSSSNNQLPFTFTLPLTSLFGTRITLQRPSPIPPFPSTNCRTRATSATVSFSLPTTKPDPGTLDKTPKWSARSIKSFAMAELEARKIKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREEIVELLGKSDMYFFSPEHPPLTEPAQKALDWAVDEKLKSGEGGEITVTHLLLGIWAQEGSAGRQILASLGFNDEKAKELAKEINGDVDLSFKKQA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3166 247 ProSiteProfiles Clp repeat (R) domain profile. 93 238 IPR004176 -
Dod02g3166 247 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 18 244 - -
Dod02g3166 247 SUPERFAMILY Double Clp-N motif 95 238 IPR036628 -
Dod02g3166 247 Pfam Clp amino terminal domain, pathogenicity island component 107 159 IPR004176 -
Dod02g3166 247 Pfam Clp amino terminal domain, pathogenicity island component 196 233 IPR004176 -
Dod02g3166 247 MobiDBLite consensus disorder prediction 1 33 - -
Dod02g3166 247 Gene3D - 95 242 IPR036628 -
Dod02g3166 247 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 18 244 IPR044217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3166 Dod-Chr2 66630214 66633487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3166 - - gmx:100802336 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3166 02 66630214 66633487 Dod02g3166 02 66630214 66633487 ECH