Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3164 ATGAGCTTCGCAGCGTACAAGATGATGCACTGCCCCACAGGCATCGACACTTGCGCATCCGGCTTCCTTACCCACTCACGCGCCGACTTCTTGCCCAGAATCCCTCCCCTCCACACCGACGACCTCGACGCCGAGTGGCCCCCCACGCGCCGCCGCGACATTGGCCCCGTCCCCAACCTCATTCTCACCTCCGCCAATGTCCTCGAAATCTATGCCGTCAGGCTCCAGGAAGACGGGGCCAAGGGCGCCGCCGCGGAGCCCCGGCGCGGCGGCATTGTCGACGGCATCGCCGGTGCCTCCCTTGAGCTCGTTTGCCATTACAGGTTGCATGGTAATGTTGAAACCATGGCTGTGTTGAGCATTGGAGGTGGTGATGCTTCTAGAAGGAGGGATTCAATCATCTTAACCTTTAAAGATGCAAAGATTTCGGTTCTAGAGTATGATGATTCTATTCATGGACTTCGTACAAGTTCTTTGCATTGTTTTGAGGGCCCAGAATGGCTTCATCTGAAAAGAGGCAGGGAACAATTTGCAAGAGGTCCACTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGGGTTCTTGTCTATGATTTGCAAATGATAATACTAAAGGCTACTCAGGCTGGTTCTGTTTTAGTTGGCGAAGATGATGCCTTGGGTTCTGGTGGTGCAGTTGCTGCTCGTATTGAGTCATCTTATATGATAAATCTGCGTGACTTGGATATGAGGCATGTAAAAGATTTTACATTTGTTCATGGCTATATTGAACCTGTGATGGTGATCCTGCATGAACATGAGCTTACTTGGGCTGGGCGTGTCTCATGGAAGCACCATACTTGCATGATATCGGCACTTAGTATCAGCACAACCTTGAAGCAGCATCCACTCATTTGGTCAGCTGTTAATCTTCCCCATGATGCCTACAAGCTTCTTGCAGTGCCGTCACCGATTGGTGGTGTTCTTGTAATTGGTGCTAACACAATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCCTTGAATAGCTACGCTGTTTCGTTTGATAGCAGTCAGGAAATGCCAAGATCAAGTTTCAATGTGGAGCTTGATGCTGCTAATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAACTGCTATTGCTTACTCTTGTTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAATCAAAAGCTTCAGTTTTGTCATCTGGTATTACGACAATTGGAGATTCTCTGTTTTTTCTTGCAAGTCGATTGGGGGACAGTATGCTGGTGCAATTTTCTTGTGGATCTGGTGTTTCAATGTTGTCATCCAGTCTAAAAGAGGAGGTTGGTGATATTGAAGTAGATGCTCCTTCAGCAAAGAGATTGCGGAGGTCACCTTCTGATGGTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCATTGTATGGATCTGCACCAAACAGAACAGAATCCGCACAGAAAACATTTTCATTTGCAGTGAGAGATTCATTGATTAATGTGGGTCCTTTGAAAGATTTCTCGTATGGATTAAGGATAAATGCTGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGCTGTTCTGGTCATGGTAAGAATGGTTCTCTTTGTGTTCTTCGGCAATCAATTCGCCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACCGTTTACCATAAAGGCACACGCTCTCATAATGCTGATTCTTCTAAGCTGGCTGATGATGAAGATGAGTATCATGCATACCTGATTATAAGCTTGGAGGCTCGTACTATGGTACTGGAAACTGGTGAGCTTCTGAGTGAGGTTACTGAAAGCGTTGACTATTATGTACAAGGTAAAACACTTGCTGCAGGGAATTTATTTGGAAGGCGTCGAGTTATCCAAGCCTTTGAACGCGGTGCTCGAATTCTAGATGGGTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCTAATTCCGAATCTAATTCTGGATCTGACAATGCCATTGCACTTGCTGTTTCTATAGCTGATCCGTATGTCTTGCTCAGAATGAGTGACGGAAGTATTCGTCTTTTGATTGGAGATCCTAGTACCTGTACCATTTCTGTCTCTCCTCCAGTTTCACTTGAAAGCTCAAAAGGATCGGTATCTTCATGCACACTGTACCATGATAAAGGGCCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCTATTGATGGCACTGATGGTGCAGCTCAGGACCATGGGGATATATATTGTGTTGTTTGTTATGAAAATGGTAGCCTTGAAATATTTGATGTGCCCAATTTTAGCTGTGTTTTTTCTGTGGAAAATTTTATGTCTGGCAAGAGCCACCTTATTGATGCTCTGATGAAAGAGGTGCCAAAAGATTCTCAAAAAGTGGATAGAGGTTCTGATGGAGTGGTCAGCCAAGGCAGGAAGGAAAATGTACCGAATATGAAGGTTGTAGAGTTGGCCATGCACAGATGGTCTGGACAGAACAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATAATTTGTTATCATGCTTACCTTTATGAAAGTCCAGACGGTACTTCAAAGGCTGAGGATTCAGTATCTGGAGGAGGAACTAGTGTTTCAAGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTGGATGCGTATGCCAGGGATGAGACATCAAATGAATCACCTTCTCAGCAAATTTCTATCTTCAAGAATATTGGTGGTTATCAAGGATTCTTCCTTTCGGGGTCAAGACCGGCTTGGGTTATGATGTTGAGAGAACGGCTTCGCGTTCATCCACAGCTATGTGATGGGTCTATCGTTGCTTTTACCGTCCTTCACAATCTGAACTGCAATCATGGGCTCATATATGTTACATCACAGGGTGTTTTAAAGATATGCCAGTTGCCTTCTGGCTCAAACTACGACTGCTACTGGCCTGTGCAGAAAGTTCCTCTAAAAGCTACTCCTCATCAAGTAACATACTTTGCAGAGAAGAATCTGTATCCACTTATTGTCTCAGCTCCTGTTCCTAAGCCGCTGAATCAAGTTGTTTCTCTGGTTGAACAAGATGTCAACCATCAGAGTGAGAGTCAGAATTTCAATCCTGATGAGCAAAACCGCTTTTATTCTGTTGATGAATTTGAGGTTCGTATTATGGAGCCAGATAAGGCTGGTGGTCCTTGGCAAACAAAGACAACAATTCCTATGCAAACTTCTGAAAATGCCCTTACTGTGAGAATGGTTACGGTGCTGAATACCACCTCAAAAGAAAATGAAACACTTTTAGCCATTGGCACTGCTTACGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGTATCCTCTTGTTCTCTTTGGGGAAAAATACTGATAATCCTCAAACTCTGGTTACGGAGGTGTACTCGAAGGAATTAAAAGGTGCTATATCTGCCTTGGCCTCACTTCAGGGCCATCTTTTGATAGCATCTGGTCCAAAAATTATTTTGCACAAGTGGACTGGCACCGAGTTGAATGGTATTGCATTTTTTGATGCGCCACCATTACATGTTGTGAGCTTAAATATTGTTAAAAACTTCATCCTTATTGGGGATATCCATAAAAGCATATACTTTCTTAGTTGGAAAGAGCAAGGTGCTCAACTTAGCTTATTGGCCAAGGATTTTGGATCTCTTGATTGTTTTGCAACAGAGTTTTTGATTGATGGAAGTACTCTGAGTCTCATGGTTTCGGATGATCAAAAAAACGTCCAGATCTTTTATTATGCACCAAAGATGTCTGAGAGTTGGAAAGGACAAAAGCTTCTTTCAAGAGCTGAATTTCATGTTGGTGCCCATGTCACTAAGTTCTTGAGGTTGCAGATGCTATCCACTTTGGATCGGACTGGTTCTGGTCCAGGCTCAGATAAAACCAATCGTTTTGCCTTATTATTTGGTACCTTGGATGGCAGTATTGGTTGTGTTGCACCTCTTGATGAAATTACATTTCGTAGACTCCAATCGTTACAGAGAAAGCTTGTTGATGCGGTACCCCATGTTGCTGGCCTGAATCCAAGAGCTTTCAGACAGTTCCGTTCAAATGGAAAGGCCCATCGCCCCGGCCCCGACAGCATAGTTGATTGCGAGCTTCTATGCCATTATGAAATGCTTCCATTGGAGGAACAACTTGAAATTGCTCACCAAGTTGGAACAACTAGATCACAAATTCTCTCAAATCTAAGTGATCTGTCTCTTGGAACAAGCTTCTTGTGA 4347 0.4412 MSFAAYKMMHCPTGIDTCASGFLTHSRADFLPRIPPLHTDDLDAEWPPTRRRDIGPVPNLILTSANVLEIYAVRLQEDGAKGAAAEPRRGGIVDGIAGASLELVCHYRLHGNVETMAVLSIGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSVLVGEDDALGSGGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHEHELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSFDSSQEMPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGDSLFFLASRLGDSMLVQFSCGSGVSMLSSSLKEEVGDIEVDAPSAKRLRRSPSDGLQDMVSGEELSLYGSAPNRTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKGTRSHNADSSKLADDEDEYHAYLIISLEARTMVLETGELLSEVTESVDYYVQGKTLAAGNLFGRRRVIQAFERGARILDGSFMTQDVSFGASNSESNSGSDNAIALAVSIADPYVLLRMSDGSIRLLIGDPSTCTISVSPPVSLESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGSLEIFDVPNFSCVFSVENFMSGKSHLIDALMKEVPKDSQKVDRGSDGVVSQGRKENVPNMKVVELAMHRWSGQNSRPFLFGILSDGTIICYHAYLYESPDGTSKAEDSVSGGGTSVSRLRNLRFVRVPLDAYARDETSNESPSQQISIFKNIGGYQGFFLSGSRPAWVMMLRERLRVHPQLCDGSIVAFTVLHNLNCNHGLIYVTSQGVLKICQLPSGSNYDCYWPVQKVPLKATPHQVTYFAEKNLYPLIVSAPVPKPLNQVVSLVEQDVNHQSESQNFNPDEQNRFYSVDEFEVRIMEPDKAGGPWQTKTTIPMQTSENALTVRMVTVLNTTSKENETLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQTLVTEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNVQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTLDRTGSGPGSDKTNRFALLFGTLDGSIGCVAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL* 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3164 1448 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1439 - -
Dod02g3164 1448 Gene3D - 56 448 IPR015943 GO:0005515
Dod02g3164 1448 Gene3D - 970 1355 IPR015943 GO:0005515
Dod02g3164 1448 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1439 - -
Dod02g3164 1448 Pfam CPSF A subunit region 1081 1413 IPR004871 GO:0003676|GO:0005634
Dod02g3164 1448 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 697 IPR018846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3164 Dod-Chr2 66601260 66621151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3164 K14401 - gmx:100785543 2615.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3164 02 66601260 66621151 Dod02g3164 02 66601260 66621151 ECH