Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3163 ATGGCCCTCGAGTCGTGGCTCATCAAGGTGAAAACCGCACTGTCCAACGGTTTCGACTCGGTTCGACCCACGAACCCGAAGAAGAAGCCGAAACGCGTCGCCGTTTTGTCCTTCGAGGTCGCTCGCGTCATGTCGAGGCTCCTCCACCTCTGGCAGTCACTCTCCGACGCCGCCGTCGTTCGCCTCCGAAACGACGCCGTATTGCTCGACGGCGTTCTGAAGCTCATTTCAAGCGACGAGTCGTTCCTCCTCGGACTCGCCCGAGCCGAGCTCGCCGAGTCACTCCGAGTCGCTGCCGACTCGGTCTCCCGACTCAGCCACATGTGCCGCGATCCTTCCCTCCGTTCCTTCCGCCGAGTCTTCACCGAGTTCGCCAACTCGGGCTTCGACCCGCACGTGTGGACACTCACGAACCCAAAAGAAATCGAAGCCAAACATAAGAAGATGGAGCGTTACGTGACACTCACGTCAACGCTTCACAGAGAAATGGAAGAGCTTTCTGTTCTAGAAAGCGCTTTGAGAAAAAAAGCACTTAACCAAAACGGTGAAACCGAAGTTTGTTCTGTTAAGGATCACCAGAAAGTTTGTGATCTTCAGCAGAAGGTTTTCTGGCAGAAGCAAGAGGTTAAGGAGTTAAAGGAAAAATCTTTGTGGAACAAAGGTTTTGATGGTGTTGTTTTGTTGCTTGTGAGGTCTATTTTTACTGTGTTAGCAAGGATTAAGATTGTCTTTGGAATTGGTCACTGTGTCCCTTCTTTGTCTCGGAGTTTATCAGCTTCCGCCACTGTTTATCCCTCAGATCAAAACCCCACTATTGCTAATGCTTCCTTCGTTTCTGGGCCGTTGAAAAGTTTGAAACTTGATGAGAATGGTGGTGTGGGGTGTGGGTTCTTTGAGTCCAACTGCAAGCTCTTGAAGCCATTGAATGGTACCTTGGGTGCTTCAGCTTTGGCCTTGCACTATGCCAATGTGATCATAATTATGGAGAAGATGATAAAGTCACCCCAGTTGGTAGGTGTTGAAGCAAGGGATGATTTGTATGGTATGTTGCCAAGTAGCATAAGGTCATCACTGAGGTCAAGGTTGAAAGGTATTGGGTTCTCTGCTTGTGATCCTGTGCTTGCTGCTGAGTGGAGGGATGCACTGGGGAGGATACTTGGGTGGATTTCACCTTTGGCTCATAACATGATTAGGTGGCAGAGTGAGAGGAGCTTTGAGCAGCAGCAGAACTTGGTTCCAAAGACCAATGTGATGCTTTTGCAGACTTTGTTCTTTGCTGATAAGGAGAAGACAGAAGCTGCCATAACTGAGCTGCTTGTTGGGCTGAACTATATTTGGAGGTTTGAGAGGGAAATTACTGCTAAGGCTTTGTTTGAATGCAACAATTTCAATGGGCTGGTAAACTTGCAGAAACCCAGCTAA 1422 0.4895 MALESWLIKVKTALSNGFDSVRPTNPKKKPKRVAVLSFEVARVMSRLLHLWQSLSDAAVVRLRNDAVLLDGVLKLISSDESFLLGLARAELAESLRVAADSVSRLSHMCRDPSLRSFRRVFTEFANSGFDPHVWTLTNPKEIEAKHKKMERYVTLTSTLHREMEELSVLESALRKKALNQNGETEVCSVKDHQKVCDLQQKVFWQKQEVKELKEKSLWNKGFDGVVLLLVRSIFTVLARIKIVFGIGHCVPSLSRSLSASATVYPSDQNPTIANASFVSGPLKSLKLDENGGVGCGFFESNCKLLKPLNGTLGASALALHYANVIIIMEKMIKSPQLVGVEARDDLYGMLPSSIRSSLRSRLKGIGFSACDPVLAAEWRDALGRILGWISPLAHNMIRWQSERSFEQQQNLVPKTNVMLLQTLFFADKEKTEAAITELLVGLNYIWRFEREITAKALFECNNFNGLVNLQKPS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3163 473 Pfam Domain of unknown function (DUF3475) 35 90 IPR021864 GO:0045927
Dod02g3163 473 PANTHER DUF3475 DOMAIN PROTEIN 1 472 - -
Dod02g3163 473 Pfam Protein of unknown function (DUF668) 311 398 IPR007700 GO:0045927
Dod02g3163 473 PANTHER BNAC09G50660D PROTEIN 1 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3163 Dod-Chr2 66583843 66586177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3163 - - gmx:100801628 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3163 02 66583843 66586177 Dod02g3163 02 66583843 66586177 ECH
Dod02g3163 02 66583843 66586177 Dod06g1479 06 19800252 19802356 PCT