Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3157 ATGAAGCTGATAGTTCCACTGCGAGGCGTGGTTCAAGGGCGCGGTGGCATCCTCCTTGGCACCCTAATCCCATGCGCACTCTTCTGCTTCCTGCAGCTCTACCGCAAACGACGCCGTTCCTCTTCCTCGTCCACCTCCAAGCTCGCAGTGCTCATCAACGACGATGATTCCCCCCCTTACCTTGGGATGAAGAGAGCCAACGCTGATCTCTACCACAAGTCCACCAACCCTCATGGGTTTTTTCAGCTTGGTATCTCCGATAACATGTTGTGTTTGGATTTGATTGGGGATTGGGTGAGGAAGTGGGGGGAGTCGCTGATGGAGAGTGGTGGTGATGGCGGCGGTTTGAGTATTAATGGCATCGCGACGTATCAGCCCTTTGATGGATTGGATGAACTGAAAATTGCCATGTCTGATTTTATGCATCAGGCTATGGGAGGATCAGTGAAATTTGAGGTATCTAAGATGGTATTAACATCCGGAGCCACTCCTGCAATTGAAATGCTAGCCTTCTGCCTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCTTATTATCCAGGTTTTGACAGGGATGTGAGATGGCGTCCAGGGGTGGACCTAATACCTGTTCACTGCTGGAGTGCTGACAATTTCAGCCTAAGTATGGCTGCTCTTGAACAGGCATATAATCAAGCCGGAAAACAAAAAGTTCGTGGAATTCTCCTTTGCAACCCTTCAAATCCTGTTGGCAATATGCTGACACCAGACATGCTTCGCAATCTTATGGACTTTGCTGAAGATAAGAACATTCATATCATTGCTGATGAATTGTTTGCAGGCTGCACATATGGAAGTGAGAAGTTTGTGAGCATTGCTGAAATCCTTGATTCAGTAGATATAGACAAGAGCCGGGTTCATATAGTATATGGCCTGTCCAAAGACCTCTCCCTTGCTGGCTTTAGAGTTGGGGTTATATATTCATTCAATCAAAGTGTTTTGAATGCAGCCAAGAGGTTAAGTAGATTTACCACTATATCTGCTCCAACCCAGAGGTTAGTTACTTCAATGCTTTCGGATAAGAGATTTATTCAGGAGTACTCTGAAACCAACAGGAACAGATTACGACAAGCGCATGATGAATTTGTGGATGGTTTAATTAAACTAGACATTAAGTGTGCTAAGAGCAGTGCTGGCATGTTCTGTTGGGCTGATATGACTGGATTAATCAAACCCTGTAGTGAGGAAGGCGAACTTGAGTTATATGAGAACTTTTTGAGTGTTGCTAAGATCAATATAACTCCTGGATCAGCCTGCCATTGCATACAACCAGGATGGTTTCGTATTTGTTTTACTACTATAACTTCGGAGGACATTCCTCTGGTTATTGAACGGATTAGGAAAGTAGTTGAAAGTTGTAAATCTTCCAGGTAG 1416 0.4499 MKLIVPLRGVVQGRGGILLGTLIPCALFCFLQLYRKRRRSSSSSTSKLAVLINDDDSPPYLGMKRANADLYHKSTNPHGFFQLGISDNMLCLDLIGDWVRKWGESLMESGGDGGGLSINGIATYQPFDGLDELKIAMSDFMHQAMGGSVKFEVSKMVLTSGATPAIEMLAFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCWSADNFSLSMAALEQAYNQAGKQKVRGILLCNPSNPVGNMLTPDMLRNLMDFAEDKNIHIIADELFAGCTYGSEKFVSIAEILDSVDIDKSRVHIVYGLSKDLSLAGFRVGVIYSFNQSVLNAAKRLSRFTTISAPTQRLVTSMLSDKRFIQEYSETNRNRLRQAHDEFVDGLIKLDIKCAKSSAGMFCWADMTGLIKPCSEEGELELYENFLSVAKINITPGSACHCIQPGWFRICFTTITSEDIPLVIERIRKVVESCKSSR* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3157 471 Pfam Aminotransferase class I and II 112 460 IPR004839 GO:0009058|GO:0030170
Dod02g3157 471 Gene3D Aspartate Aminotransferase, domain 1 69 459 IPR015422 GO:0003824
Dod02g3157 471 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 46 468 - -
Dod02g3157 471 SUPERFAMILY PLP-dependent transferases 57 465 IPR015424 -
Dod02g3157 471 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 43 - -
Dod02g3157 471 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 43 - -
Dod02g3157 471 PANTHER AMINOTRANSFERASE ACS12-RELATED 46 468 - -
Dod02g3157 471 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 305 318 IPR004838 GO:0003824|GO:0009058|GO:0030170
Dod02g3157 471 Gene3D - 103 354 IPR015421 GO:0003824
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 299 323 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 177 198 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 109 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 229 253 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 155 175 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 331 354 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 118 134 - -
Dod02g3157 471 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 288 - -
Dod02g3157 471 CDD AAT_like 124 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3157 Dod-Chr2 66556347 66558917 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3157 K14270 - gmx:100800539 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3157 02 66556347 66558917 Dod02g3157 02 66556347 66558917 ECH