Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3102 ATGTGTCAGCCAACATCTCATGACCTCACCAGCAACACCAGTCCTGACTACCAAATTCCAAACAAGGACCCTGAGAACCCCATCATCAACATGCTGACCAAACCATTGATCACCAAAAAAGTCCCAACACCCCACAAAGGAGAAAAGAACAACCTACCACTGGAAACAACACAGGAAACTCATCTCCCTGACGCCTTCAGGGAAGTGATTTCCATATCCAAAATAGCACTTCCAATGATACTCACTGGCCTCCTGCTGTATTGCAGGTCAATGATCTCCATGCTCTTCCTTGGTCATCTTGGAGAGCTAGCCTTAGCAGGTGGTTCACTAGCTATTGGTTTTGCAAACATCACAGGCTACTCAATCCTCTCTGGTCTTGCAGTTGGAATGGAACCAATCTGTGGACAAGCTTTTGGTGCCAAAAGGTTCACCCTTCTTGGCCTATGCTTGCAGAGAACTATTCTTTTGCTTCTTTTCACTTCCATCCCCATATCTTTGCTCTGGCTCTACATGAAGCAAATCCTTCTCTTGTGTGGCCAAGATGAAGCCATAGCCACACAAGCACAATCATATCTCCTCTATTCCATCCCTGACCTCATAGCACAGTCCTTCTTGCACCCATTGAGGATTTACCTTAGAAGCCAATCCATTACTCTGCCTCTCACCCTTTGTGCCACCTTGTCAATCTTGCTTCACATACCAATAAACTATTTCTTTGTTTCTCACCTCAACCTTGGCATCAGAGGTGTTGCTCTTAGTGGGGTGTGGACAAATTTCAACCTTGTGGCTTCTTTGGTGCTTTACGTCATCCTCTCAGGCACTCACAAGAAGACATGGGGTGGCTTCTCTTTTGAGTGTTTCACACAATGGAAGTCACTCCTCAATTTGGCAGTTCCTAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTATGAGATAATGATCTTGCTATGTGGCTTGTTGATAAACCCAAGAGCAACAGTGGCTTCCATGGGGATTTTGATCCAAACCACTTCTTTGCTCTACATTTTCCCATCATCCTTAAGCTTCAGTGTGTCAACAAGGGTAGGGAACAAGCTAGGTGCACAGAAGCCATCAAAGGCAAAGCTTTCTGCCATTGTGGGACTCTCTTGCAGCCTCATATCAGGTGTCTCAGCACTGGTCTTTGCTCTAATGGTTAGGAACATATGGGCTAGCATGTTCACAAAGGACAAAGAGATCATAGCATTGACATCTATGGTGTTACCTATTATAGGTCTTTGTGAGCTTGGAAACTGTCCTCAGACCACAGGATGTGGTGTGCTGAGAGGCACAGCAAGGCCTAAGACTGGTGCTAACATCAACTTGGGGTGCTTCTACCTTGTGGGAATGCCTGTGTCAATTTGGCTGGCTTTCTTTGCTGGTTTTGATTTTCAAGGCCTTTGGCTTGGGCTACTTGCTGCTCAAGGGTCATGTGCAGTGACCATGTTGGTGGTTATTTGTAGAACAGATTGGGAGTTTGAGGCTCAAAGAGCTGAGAAACTAACAGGTACAGGATCAGTAGGAGTTTTTGATGATGATGATGTTGATGGTGACAACAACAACCAAGAAGAGGTTGCGGCAGAGAAGCCACCAAAAATCTTTGTCATTGGCTGA 1635 0.4569 MCQPTSHDLTSNTSPDYQIPNKDPENPIINMLTKPLITKKVPTPHKGEKNNLPLETTQETHLPDAFREVISISKIALPMILTGLLLYCRSMISMLFLGHLGELALAGGSLAIGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQRTILLLLFTSIPISLLWLYMKQILLLCGQDEAIATQAQSYLLYSIPDLIAQSFLHPLRIYLRSQSITLPLTLCATLSILLHIPINYFFVSHLNLGIRGVALSGVWTNFNLVASLVLYVILSGTHKKTWGGFSFECFTQWKSLLNLAVPSCISVCLEWWWYEIMILLCGLLINPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSLISGVSALVFALMVRNIWASMFTKDKEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKTGANINLGCFYLVGMPVSIWLAFFAGFDFQGLWLGLLAAQGSCAVTMLVVICRTDWEFEAQRAEKLTGTGSVGVFDDDDVDGDNNNQEEVAAEKPPKIFVIG* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3102 544 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g3102 544 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g3102 544 PANTHER MULTIDRUG RESISTANCE PROTEIN 54 520 - -
Dod02g3102 544 TIGRFAM matE: MATE efflux family protein 78 475 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3102 544 Pfam MatE 78 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3102 544 Pfam MatE 299 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3102 544 CDD MATE_eukaryotic 68 504 IPR045069 GO:0042910|GO:1990961
Dod02g3102 544 PANTHER PROTEIN DETOXIFICATION 54 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3102 Dod-Chr2 65810172 65812227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3102 K03327 - gmx:100787316 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3102 02 65810172 65812227 Dod06g0741 06 9023970 9025602 ECH
Dod02g3102 02 65810172 65812227 Dod02g3102 02 65810172 65812227 ECH