Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3075 ATGAACAACATGTCTAGGACTAGGAGAGATCTGGAAAGTGGTAGTGGGGCAAACAAGAACAACATAGGAGCACCAATAGGGAACAACAACAACAACAACAACATCAACTACTCTGTTGCTACTGCCTCCTCCTCTTCTTATGTTTATGACCCAGAAACCAATTGGACATCATGGCTTGTTCCAATGTTCGTGCTCGCCAATTGTGTTGTTTTCATTGTGCTTATGTACATCAACGATTGTCCAAAGAAGAACCCTGGCGTGCAAGGTCAATGTGTCGCAAGATTCCTCGGCAGATTCTCCTTCCAGCCTCTACGGGAGAATCCGTTGTTTGGCCCTTCTTCGTCAACATTGGCAAAGATCGGAGCCCTTCAATGGGACAATGTTGTGAATCATCATCAGGGATGGAGACTAATCACTTGCATTTGGTTACATGCTGGAATTGTTCATTTGGCAGCAAACATGTTGAGTCTGGTCTTTATTGGTATTCGACTTGAACAACAATTCGGGTTTGTGAGGATAGGAATCATCTACCTGTTGTCCGGATTTGGTGGGAGTGTACTGTCTTCCCTGTTTATCAGAAACAATATCTCTGTTGGTGCTTCTGGAGCACTTTTTGGACTGCTTGGAGCAATGCTTTCAGAACTTATCACAAACTGGACTATTTATACCAACAAGGCTGCTGCATTGCTCACACTGTTGGTTATTATTGTCATCAATCTTGCCATTGGCATTTTGCCACATCTGGATAACTTTGCTCATATTGGGGGGTTCCTGACAGGATTTCTTCTTGGTTTTATCTTACTTCCTCGTCCTCAATATGGTTGGTTAGGGCAGCAACGTCTTCCTTCTGGTGTTCGCCTAAAGTCAAAATACAAGGCTTACCAATATGTTTTATGGATTCTGTCTCTTGTTCTATTGATTGCTGGGTTATTGATTGCTTTGGCCATGCTATTCCGGGGTGACAGTGGTTATGATCATTGTCACTGGTGTCGCTACCTATCTTGTGTTCCAATTTATAAATGGAAATGCAATGACAGTTAA 1041 0.4284 MNNMSRTRRDLESGSGANKNNIGAPIGNNNNNNNINYSVATASSSSYVYDPETNWTSWLVPMFVLANCVVFIVLMYINDCPKKNPGVQGQCVARFLGRFSFQPLRENPLFGPSSSTLAKIGALQWDNVVNHHQGWRLITCIWLHAGIVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWTIYTNKAAALLTLLVIIVINLAIGILPHLDNFAHIGGFLTGFLLGFILLPRPQYGWLGQQRLPSGVRLKSKYKAYQYVLWILSLVLLIAGLLIALAMLFRGDSGYDHCHWCRYLSCVPIYKWKCNDS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3075 346 SUPERFAMILY Rhomboid-like 54 272 IPR035952 -
Dod02g3075 346 PANTHER RHOMBOID-RELATED 33 345 IPR002610 GO:0004252|GO:0006508|GO:0016021
Dod02g3075 346 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g3075 346 PANTHER RHOMBOID-LIKE PROTEIN 3 33 345 - -
Dod02g3075 346 Gene3D - 53 270 IPR035952 -
Dod02g3075 346 Pfam Rhomboid family 130 271 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3075 Dod-Chr2 64980283 64983058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3075 - - gmx:100813345 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3075 02 64980283 64983058 Dod06g0749 06 9145319 9149117 ECH
Dod02g3075 02 64980283 64983058 Dod02g3075 02 64980283 64983058 ECH