Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3063 ATGGATGACCCCGGCTCCGATGTGCTGCCACAAGGTTGGACTGTGGAAGTGAAAGTGAGAAAGAGTGGCAAGAGAGACAAGTATTACTTATCCCCCGCAAGTGGACTAAAATTCAATTCCAAGGTAGAGGTTCTTCGGCATCTTGACAATGTTCAGAACAAAGTCAGCATTCAGAGAGTTGCAGACAATGTTGTAGTTGAGAAAGGTGTTGCAGAAGGACTACCACCAGGTTGGATGAAAAAGACCAGAGTCACAACAAAGGGAGATACAATTAGAAGAGATTCGTACTACATTGATCCTGTAAGTGGGTATGCATTCCGCTCTGTAAAAGACGTTGATCGCTATCTTGAATCTGGGGAAATAGGAAGGAACGCATTCAAGCCAAAAGACAGCAGTGGCATGGAGCTAAAAGCTAATGAGTCCTCTTCAACAGGGGTAACCACAACACCAACATTACCTGTTAGCACGGGACCGAGCTCATGTTTGGGCATGATAGCCAATGACCAACAGGTTCAGAAACCTGCATGTTCAGGAGAATATGTGTCTATGCCCATCTCGGAAAATATTTCCTCTCAATGTGTGGTGGGCACTGAATTGATCTCCCCAGTGCTTTTGCAAGCTGAAGGTTCAGATCAGAAAGAAGGGAAGGTTGACTTAACTGATACCACCTCAGTTCTAGGTTGCACATATGAAAAATCCCAGGGGAAGCAACTTCAAGAAAATGAACAGCCAAAACGTGGAACTGAAAAATCCCAAGTTCGGCAGCGCAAAAGACATAAGAAGGAGATCAATTTGCCTCGCCGTTCTTCAAAGCGTCTTGCTGGAATTCAGGTTGATCCAGTTCCAGAACTTATAACAAGAAGCCGAGGACGCCGAGCTGCAGTTAAACAATCAGCCGAGGGAGAAACTGTCCTAAATGAGGATAAATACTCCAACAGCTTGCTGAGTGGTGCGGCAAAACAGACTAATGCTCTTGAGGTTGGGTCAGAAACCAAGTGCAAATCCGAAAGTACCACAACCACAGTGGAGTCTCCTAAGTCATGTCAGAGTAGGCATTTGTATGGTGAGTTCTCTACTCCAGAATGGATTCCTGAGAGGACTAAAGAAGAGCATGGAAGTGACAAGGATCAAGAGTGCTTTTCATTTTGGCCTCAAGAGAACCATGCTACTATGAAAGACAATACGAGAGGCATTAAAAATGGAGACAAGGTTGATGCTACGCTGGATTATGCACTTGAGTTTCCTCTTAGCGAAATACTAACAGACCCATGTATTGCGTTTGCGGTACAAACTCTCACTGGAGTAACATTTGACACCTCGAAAACCTCACAGGTTTCTGCTGAACCAAGAAACGGTGAGCATTCCGAAACTTTGCCTGCTGCTGAAGGGTATGGCAACAAACTCAAAGGGTCAATTGTGGGAAATGATAAGGGAGGGTGCAATGTGTTTTCACATCCAGAAAACTATGCCATTCCACAAGAACATGCTGGGGATGGTGGAATTGCTAATAAGGCCAATGAAAACACAGCCACAGGATCATCTTCTGAAAAGACACTTGATATTCTGAGCATGGATCCATGCATTGAATTCGCAATAAAAACTCTTACCGGCACCATCCCATTAGACCCTCATCAGAATCCCAAGAACTGCAGCATTCAACAGCAACTGAGCTCTTCAAACCCCCATCATGGTGAGATGGCCTTGCCAAGTGTCAGCTTAGACAACTTTGGTACACAGATACCAATTTTCAAACAGTCTTTTGTGGATCCAACACCTCAACACACCAGAAATGTTGGCATAGGAAATTCTTCTGGAGCTAGAATCCCCCATTCTGGTGGTGGTGATGATGGAAGGAATGCTTGCTAG 1866 0.448 MDDPGSDVLPQGWTVEVKVRKSGKRDKYYLSPASGLKFNSKVEVLRHLDNVQNKVSIQRVADNVVVEKGVAEGLPPGWMKKTRVTTKGDTIRRDSYYIDPVSGYAFRSVKDVDRYLESGEIGRNAFKPKDSSGMELKANESSSTGVTTTPTLPVSTGPSSCLGMIANDQQVQKPACSGEYVSMPISENISSQCVVGTELISPVLLQAEGSDQKEGKVDLTDTTSVLGCTYEKSQGKQLQENEQPKRGTEKSQVRQRKRHKKEINLPRRSSKRLAGIQVDPVPELITRSRGRRAAVKQSAEGETVLNEDKYSNSLLSGAAKQTNALEVGSETKCKSESTTTTVESPKSCQSRHLYGEFSTPEWIPERTKEEHGSDKDQECFSFWPQENHATMKDNTRGIKNGDKVDATLDYALEFPLSEILTDPCIAFAVQTLTGVTFDTSKTSQVSAEPRNGEHSETLPAAEGYGNKLKGSIVGNDKGGCNVFSHPENYAIPQEHAGDGGIANKANENTATGSSSEKTLDILSMDPCIEFAIKTLTGTIPLDPHQNPKNCSIQQQLSSSNPHHGEMALPSVSLDNFGTQIPIFKQSFVDPTPQHTRNVGIGNSSGARIPHSGGGDDGRNAC* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3063 621 MobiDBLite consensus disorder prediction 589 604 - -
Dod02g3063 621 MobiDBLite consensus disorder prediction 126 153 - -
Dod02g3063 621 Pfam Methyl-CpG binding domain 74 119 IPR001739 GO:0003677
Dod02g3063 621 Pfam Methyl-CpG binding domain 7 58 IPR001739 GO:0003677
Dod02g3063 621 MobiDBLite consensus disorder prediction 589 621 - -
Dod02g3063 621 MobiDBLite consensus disorder prediction 251 266 - -
Dod02g3063 621 MobiDBLite consensus disorder prediction 135 153 - -
Dod02g3063 621 SUPERFAMILY DNA-binding domain 71 121 IPR016177 GO:0003677
Dod02g3063 621 Gene3D - 5 55 - -
Dod02g3063 621 MobiDBLite consensus disorder prediction 491 516 - -
Dod02g3063 621 MobiDBLite consensus disorder prediction 443 463 - -
Dod02g3063 621 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 64 141 IPR001739 GO:0003677
Dod02g3063 621 SUPERFAMILY DNA-binding domain 8 53 IPR016177 GO:0003677
Dod02g3063 621 PANTHER OS04G0193200 PROTEIN 1 606 IPR038945 -
Dod02g3063 621 MobiDBLite consensus disorder prediction 230 277 - -
Dod02g3063 621 Gene3D - 56 151 - -
Dod02g3063 621 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 1 606 - -
Dod02g3063 621 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 63 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3063 Dod-Chr2 64864125 64871443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3063 - - lang:109363276 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3063 02 64864125 64871443 Dod02g3063 02 64864125 64871443 ECH