Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3049 ATGTTGAAGGGGACAAACTGCCAAAACAAGGCAAGGTGCGCGAAATTGGCATACAAGTTTTTCTTGTGGTGTGGACAGCAGGAGGGTTACTGGCACACTGCCAATTCCTACCACTTGGTCATGCAGATATTCGCGGAGTGTGAGGAGTTGAAGGCAATGTGGAGGCTTGTGGATGAGATGATTGAAAAAGGGTTTCCGGCTACTGCCCGTACTTTCCACATCTTGATTTGTACTTGTCAGTACAAGTTGATTGAGTGGGTTCACAGAGAAATGTTGCTTGAGGGTTTTTCCTCGGATGTTTTAACTTATAATATTGTCATGCTTGCGAAGTATAGACTTGGGAAACTCAATCAGATGGTGGGTCCACATGCGAAGAAGCTGGATGTTGCCACCAGCGATGTTCCCAGTTGCGGCGACAGCGATTGCAGCATTGGCGGGGCTACTCTGCGGAGGACGATGGTTCAGGTTCCAGCCGCGATAAAGGGCGGCGCTTATCAGGCGCGCAGCGGCCAGCGCAGTCGTCGGCAGGTAGTGGCGGGTGGAGCTGCGAGACAGTACGAAGGTGTTAATGGAGACAACAAGTGA 585 0.5094 MLKGTNCQNKARCAKLAYKFFLWCGQQEGYWHTANSYHLVMQIFAECEELKAMWRLVDEMIEKGFPATARTFHILICTCQYKLIEWVHREMLLEGFSSDVLTYNIVMLAKYRLGKLNQMVGPHAKKLDVATSDVPSCGDSDCSIGGATLRRTMVQVPAAIKGGAYQARSGQRSRRQVVAGGAARQYEGVNGDNK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3049 194 PANTHER OS10G0506000 PROTEIN 80 119 - -
Dod02g3049 194 PANTHER OS10G0506000 PROTEIN 2 79 - -
Dod02g3049 194 TIGRFAM PPR: pentatricopeptide repeat domain 36 67 IPR002885 -
Dod02g3049 194 Gene3D Tetratricopeptide repeat domain 5 130 IPR011990 GO:0005515
Dod02g3049 194 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 80 119 - -
Dod02g3049 194 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 2 79 - -
Dod02g3049 194 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 33 67 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3049 Dod-Chr2 64662258 64663976 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3049 - - ccaj:109794849 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3049 02 64662258 64663976 Dod02g3049 02 64662258 64663976 ECH