Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3028 ATGCATTGCTCTTCTTCCTCAACTTCAAGTACCAGTGCTGTTACTGTTGGGGAAGCTGCTCACAACGATGATTTGAATCTGAAGCCAAACGAGTCAAGGTTCTTGGCTTCACTCATGCCAAAGAAAGAGATTGGCGTCGATCGCTTCCTCGACGCCCACCCTAACTACGATGGTCGCGGTGCCCTCGTCGCCATCTTCGATTCTGGTGTAGACCCGGCTGCTGCTGGATTGCAGGTTACCTCAGATGGGAAACCCAAAATTCTTGATGTCATCGATTGCTCTGGGAGTGGAGATGTTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTAGTGGCGCATCTGGGGCTTCTTTGGTTATCAATAGTTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTCACAGAAGATTTGGTTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCCAAGGCTGTAAAACAGCTTCATGATTTTGATCAGCAACACAAAAAGGTGGATGATGCAAAACTTAAAAGGACTCGTGAAGATCTCCAGAATAGGCTTGATCTTCTGAGAAGGCAATCTGAGAGCTACGATGATAAAGGGCCTGTCGTAGATGCTGTTGTTTGGCATGATGGAGAGGTCTGGAGGGTTGCTGTTGACACACAGAGTCTTGAGGATGATCCAGATTGTGGGAAGCTTGCTAACTTTGTGCCCTTAACAAATTATAGGATTGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTAAGTATTGTAACAGACTGCTCTCCCCATGCCACCCATGTTGCTGGTATTACTGCTGCTTTCCATCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAATTAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCTATGGAAACTGGAACTGGTTTGATTCGGGCGCTAATAGCTGCTGTGGAGCATAAATGTGATCTTATCAACATGAGTTATGGCGAAGCAACATTACTGCCAGACTATGGACGCTTTGTTGACCTTGTTAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTAAGCAGTGCTGCTAATAGTGGGCCAGGACTGACCACTGTTGGCGCACCTGGTGGGACATCTTCAAGCATCATAGGTGTTGGTGCATATGTTTCTCCTGCTATGGCTGCTGGTGCACATTGTGTTGTTGAACCTCCAGCTGAGGGGCTTGAGTACACTTGGTCTAGCCGAGGTCCAACAGCTGATGGAGACCTTGGCGTGTGTATAAGCGCTCCAGGCGGTGCTGTTGCTCCTGTTCCTACATGGACTCTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCTTGTGGAGGAACTGCACTGCTGATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAGAATACAGCTATTCCCGTAGGGGATTTACCAGAGGATAAATTAACCACTGGACAAGGACTTATGCAAGTTGACAAGGCTTATGAATATATACAGAAGTGTCAGAACTTTCCATGTGTTTGGTATAAAATAAATGTCCAGCAGTCTGGAAAAACATATCCTTCATCACGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCCGACAATGTACTGAGTGGATAGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAGCAACTTCAAGGAATTGGTTCCATTTGAGGAGTGTATTGAGTTACATTCTTCTGATACCACAGTTGTGAAGGCCCCTGACTATTTGCTGCTCACTCATAATGGCCGCACCTTTAGTGTAGTTGTGGATCCTTGCAATCTATCAGATGGTCTTCATTATTATGAGGTCTATGGTATTGACTGCAAAGCACCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACCATAACCAAGCCCAAGGCTGTAACTAATCAGCCTCCACAAGTTTCATTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGAAGATATATAGAAGTTCCACATGGTGCTTCTTGGGTTGAAGCAACAATGAAAACATCTGGTTTTGATACAGCTCGAAAATTTTATGTGGACACTGTTCAGATACGCCCACTGCAAAGACCTCTGAAATGGGAGAATGTGGTAAGTTTTCCATCTCCCGCTGACAAAAGCTTTGCCTTTGGGGTTGTAAGCGGTCAGACATTGGAACTAGTCATTTCTCAGTTTTGGTCAAGTGGGATAGGGAGCCAGGAGACTGCCAGTGTGGATTTTGAGGTTGTGTTCCATGGTATAAAAGTCAATCAGGAAGAAGTTATACTTGATGGTAGTGAAGCACCAGTCCAAATTGAAGCTGAAACATTACTGGCATCTGAGGAACTTGCACCAGCAGCAATTCTAAACAAGATAAGGGTTCCATATCGACCTGTAGATTCTACGATTAATGCACTTTCAACAGATCGCGACAAACTCCCCTCTGGAAAGCAGACACTGGCACTGATTTTGACATACAAGGTCAAATTGGAAGATGGAGCTGAAGTGAAACCTCATATACCTTTGCTCAATAACCGGATATATGATAATAAAATTGAGTCTCAATTTTATATTATTTCCGATTCAAATAAGCGTGTATATTCAAGTGGAGATGTCTATCCAAGCTCCGCTAAGCTTCCCAAGGGAGAATACAATTTACAGCTATATTTGAGGCATGACAATGTGCAAATTTTGGAGAAGATGAGGCATTTGGTGCTATTCATTGAGCGGAATTTGGAAGAGAAGGAAGTCATTCGGCTATCCTTTTTTTCTCAACCTGATGGTCTGCTGATTGGAAATGGTTCCTTTAAGTCATCATTGTTATTTCCAGGTGTAAAAGAAGGATTTTATCTGGGTCCACCACCAAAAGATAAGCTTCCCAAGAATTCTACACAAGGATCTGTATTGTTAGGGGCAATATCATATGGGAAACTGTCATTTGATGATAAGGGAGAGAATAGAAATCCAGAAAAGCACCCTGCAGCATATCCGCTTTGTTATGTAGTTCCTCCAAATAAGATTGATGAGGACAAGGGAAAAGGTTCTTCCTTTTCTTCCAAGAAGACTGTTTCTGAACGTTTGGAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTAGGAGGCCTTAAACAAGAAACTGATGAAGAGCGCTCGGAGTGGGAAGAACTATCTGCCTCGCTTAAATCAGAATATCCAAAATACACTCCATTGCTTGCAAAGATTTTGGAGGGTTTGGTCTCTAGGACTAATGACAGAGATAAGCTCCATCATGATGAAGAGGTGATTGATGCAGCAAATGAGGTGATTGACAGTATTGACAGGGAAGAGTTAGCAAAATTTTTTGCACTAAGAAATGATCCAGAAGATGAGGAAGCAGAGAAAATCAGGAAAAAGATGGAGTCAACCCGTGACCAGTTAGCAGAGGCATTGTATCAGAAGGGGCTTGCACTGGCAGAGATAGAGTCTTTACAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGGGGTGGATGAGTTCTCAACTTTGGCTGCAACAGAAGGTGCGAAAAAAGGAGACAAGAGTGAGAAGCAATCTTCAGATGACGGGAGTGATCCAGACTTGTTTGAGGAGAACTTCAAAGAATTGAAGAAATGGGTTGATGTGAAGTCCCCTAAATATGGAATCCTCTTAGTAACGCGTGAGAGGCGTGCTCAAAGGCTTGGGACAGCATTGAAGGTACTAAGTGAAATAATTCAAGATGATACAGAGCCTGCCAAGAAGAAATTCTATGAACTGAAGCTCTCTTTGATTGATGAGATTGGATGGAAACATTGGGCAACATATGAAAGAGAGTGGATGCTTGTGCGTTTCCCTCCAAGCTTGCCCCTCTTCTAG 4005 0.4327 MHCSSSSTSSTSAVTVGEAAHNDDLNLKPNESRFLASLMPKKEIGVDRFLDAHPNYDGRGALVAIFDSGVDPAAAGLQVTSDGKPKILDVIDCSGSGDVDTSKVVKADADGCISGASGASLVINSSWKNPSGEWHVGYKLVYELFTEDLVSRLKKERKKKWDEKNQEEIAKAVKQLHDFDQQHKKVDDAKLKRTREDLQNRLDLLRRQSESYDDKGPVVDAVVWHDGEVWRVAVDTQSLEDDPDCGKLANFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDCSPHATHVAGITAAFHPKEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAANSGPGLTTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPAEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRKALENTAIPVGDLPEDKLTTGQGLMQVDKAYEYIQKCQNFPCVWYKINVQQSGKTYPSSRGIYLREASACRQCTEWIVQVDPKFHEDASNFKELVPFEECIELHSSDTTVVKAPDYLLLTHNGRTFSVVVDPCNLSDGLHYYEVYGIDCKAPWRGPLFRIPITITKPKAVTNQPPQVSFSKMLFQPGHIERRYIEVPHGASWVEATMKTSGFDTARKFYVDTVQIRPLQRPLKWENVVSFPSPADKSFAFGVVSGQTLELVISQFWSSGIGSQETASVDFEVVFHGIKVNQEEVILDGSEAPVQIEAETLLASEELAPAAILNKIRVPYRPVDSTINALSTDRDKLPSGKQTLALILTYKVKLEDGAEVKPHIPLLNNRIYDNKIESQFYIISDSNKRVYSSGDVYPSSAKLPKGEYNLQLYLRHDNVQILEKMRHLVLFIERNLEEKEVIRLSFFSQPDGLLIGNGSFKSSLLFPGVKEGFYLGPPPKDKLPKNSTQGSVLLGAISYGKLSFDDKGENRNPEKHPAAYPLCYVVPPNKIDEDKGKGSSFSSKKTVSERLEEEVRDAKIKVLGGLKQETDEERSEWEELSASLKSEYPKYTPLLAKILEGLVSRTNDRDKLHHDEEVIDAANEVIDSIDREELAKFFALRNDPEDEEAEKIRKKMESTRDQLAEALYQKGLALAEIESLQLADLTWCILSKGVDEFSTLAATEGAKKGDKSEKQSSDDGSDPDLFEENFKELKKWVDVKSPKYGILLVTRERRAQRLGTALKVLSEIIQDDTEPAKKKFYELKLSLIDEIGWKHWATYEREWMLVRFPPSLPLF* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3028 1334 ProSiteProfiles Serine proteases, subtilase domain profile. 43 541 - -
Dod02g3028 1334 MobiDBLite consensus disorder prediction 1225 1243 - -
Dod02g3028 1334 SUPERFAMILY Subtilisin-like 44 542 IPR036852 GO:0004252|GO:0006508
Dod02g3028 1334 Gene3D - 554 688 - -
Dod02g3028 1334 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 38 520 IPR034051 GO:0006508|GO:0008240
Dod02g3028 1334 Gene3D - 1064 1334 - -
Dod02g3028 1334 ProSitePatterns Serine proteases, subtilase family, serine active site. 478 488 IPR023828 -
Dod02g3028 1334 Pfam Subtilase family 58 521 IPR000209 GO:0006508|GO:0008236
Dod02g3028 1334 PANTHER TRIPEPTIDYL PEPTIDASE II 26 1217 - -
Dod02g3028 1334 Coils Coil 1086 1106 - -
Dod02g3028 1334 MobiDBLite consensus disorder prediction 1223 1243 - -
Dod02g3028 1334 Pfam Tripeptidyl peptidase II 821 1006 IPR022229 -
Dod02g3028 1334 PANTHER PEPTIDASE S8 26 1217 - -
Dod02g3028 1334 Gene3D Peptidase S8/S53 domain 218 551 IPR036852 GO:0004252|GO:0006508
Dod02g3028 1334 Gene3D Peptidase S8/S53 domain 41 135 IPR036852 GO:0004252|GO:0006508
Dod02g3028 1334 Coils Coil 188 215 - -
Dod02g3028 1334 Coils Coil 1168 1188 - -
Dod02g3028 1334 Gene3D - 156 214 - -
Dod02g3028 1334 PRINTS Subtilisin serine protease family (S8) signature 58 77 IPR015500 -
Dod02g3028 1334 PRINTS Subtilisin serine protease family (S8) signature 477 493 IPR015500 -
Dod02g3028 1334 PRINTS Subtilisin serine protease family (S8) signature 290 303 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3028 Dod-Chr2 63883532 63901403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3028 K01280 - gmx:100798235 2242.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3028 02 63883532 63901403 Dod02g3028 02 63883532 63901403 ECH
Dod02g3028 02 63883532 63901403 Dod06g0796 06 9738489 9761359 PCT