Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g3021 | ATGTACAAACAGTTTTTGTCTGCCAAGGAGTGTGACTACCTTATTTCCTTGGCGTATGATGTGAAAGAAAAATCCTCGAGTAAAAAAGATGGCCATTCAGAGGATGTTGCTGCAAACAGGAGGCTTACATCTGAAATTTCATTGGATATAGAAGATGATATTGTTGCAAGGATTGAGGAAAGACTTTCAGTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCATGCATTACGAGCTTGAACATGATGGGCAGAACTTAGATTATTTTACAAACAAAACCAAATTGGAACTAAGTCGACCTTTAATAGCAACAGTTATTTTATATCTCTCAAACGCTACCGAAGGGGGCCAAATTCTTTTTCCTAAATCAGAGCCCAAGAGTAGCAGCATGTCTGATTGTAGAGAAAGTAATAAGATTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTCTTCTCTCTTCACCCAAGTGCATCTCCTGACAAGAGTAGCTTACATGCTAGGTGCCCTGTCCTTGAGGGGGATATGTGGTCTGCAATGAAATACTTTTATGCAAGACCAATTAGTGGCGGAGGGAAGGTCACAACCATATCAGATGGTGGTGAATGCACCGATGAGGATGACAATTGTCCCACTTGGGCAGCCGTAGGAGAATGTCAACGAAATCCTGTGTTCATGATTGGCTCTCCAGATTATTATGGTACATGTAGGAGAAGTTGTAATGCATGCTGA | 741 | 0.4143 | MYKQFLSAKECDYLISLAYDVKEKSSSKKDGHSEDVAANRRLTSEISLDIEDDIVARIEERLSVWTFLPKENSKPLQVMHYELEHDGQNLDYFTNKTKLELSRPLIATVILYLSNATEGGQILFPKSEPKSSSMSDCRESNKILQPVKGNAILFFSLHPSASPDKSSLHARCPVLEGDMWSAMKYFYARPISGGGKVTTISDGGECTDEDDNCPTWAAVGECQRNPVFMIGSPDYYGTCRRSCNAC* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g3021 | 246 | Pfam | 2OG-Fe(II) oxygenase superfamily | 77 | 187 | IPR044862 | - | |
| Dod02g3021 | 246 | Gene3D | q2cbj1_9rhob like domain | 1 | 187 | - | - | |
| Dod02g3021 | 246 | PANTHER | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT | 1 | 246 | IPR045054 | - | |
| Dod02g3021 | 246 | SMART | p4hc | 1 | 187 | IPR006620 | GO:0005506|GO:0016705|GO:0031418 | |
| Dod02g3021 | 246 | SMART | ShkT_1 | 205 | 246 | IPR003582 | - | |
| Dod02g3021 | 246 | PANTHER | PROLYL 4-HYDROXYLASE 12-RELATED | 1 | 246 | - | - | |
| Dod02g3021 | 246 | ProSiteProfiles | ShKT domain profile. | 206 | 246 | IPR003582 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g3021 | Dod-Chr2 | 63798073 | 63801497 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g3021 | K00472 | - | gmx:100775928 | 377.481 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod02g3021 | 02 | 63798073 | 63801497 | Dod02g3021 | 02 | 63798073 | 63801497 | ECH |