Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3015 ATGTGTCCATCTGGATTCTCAGCAACTTCCACTGCCGAAGAAGTTACTCAAGGCATCGATGGGAGTGGCCTCACTGCCATTATCACAGGAGCAAACAGAGGTATTGGAGCTGAGACTGCAAGAGTTCTCGCTTTGCGTGGAGTCCACGTGATTCTGGGGGTGAGAAATTTGATTGCTGCAAAAGATGTCAAAGAGGCAATACTTAAGGAGTTTCCAACAGCTAAAGTTGATGCCATGGAGTTAGACCTCAGTTCAACGGAGTCTGTCAGGAAATTTGTGTCAGAGTTCAACTCCTCTGGTCTTCCATTGAACATCTTAATAAACAATGCAGCAGTCCTGGCAATCCCATTCACGCTTTCCAAAGACAACATTGAACTACAATTTGCGACAAATCACGTAGGTCATTTTCTTTTGACAAATCTCTTGTTGGATACTATGAAGAAAACAGCACATGAAAGTAAGATAGAAGGAAGAATTATTAACATCTCCTCGGATGGTCACAAATTTACGTATCCTGAAGGAATTCAGCTTGCAAAAATCAACGATCAATCAAGTTACAACATTTGGTATGCATATGGGCAATCAAAGCTTGCTAACATTTTACATGCCAGCGAACTTGCAAGGCGTCTCAGAGAAGATGGGGTAGACGATGTTACTGTTAATTCTCTTCATCCGGGGGCTGTTGTCACCAATATCTTAAATCCTGAGCTTGTTGGCTCTATACCATCCGATCTAATTAAATCGCTTGGTGAATATATAATTAAAACTGTCCAGCAGGGAGCGGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAATTAGTGGCCAGTATTTTTCAGACTGCGATGTGGCCAAACCAAGCTCACAAGGAACGGACACCGATTTGGCCAAGAAACTCTGGGATTTCAGCATGAAATTAATTGAGTAG 936 0.4263 MCPSGFSATSTAEEVTQGIDGSGLTAIITGANRGIGAETARVLALRGVHVILGVRNLIAAKDVKEAILKEFPTAKVDAMELDLSSTESVRKFVSEFNSSGLPLNILINNAAVLAIPFTLSKDNIELQFATNHVGHFLLTNLLLDTMKKTAHESKIEGRIINISSDGHKFTYPEGIQLAKINDQSSYNIWYAYGQSKLANILHASELARRLREDGVDDVTVNSLHPGAVVTNILNPELVGSIPSDLIKSLGEYIIKTVQQGAATTCYVALHPQVKGISGQYFSDCDVAKPSSQGTDTDLAKKLWDFSMKLIE* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3015 311 Gene3D - 16 311 - -
Dod02g3015 311 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 311 - -
Dod02g3015 311 Pfam short chain dehydrogenase 25 234 IPR002347 -
Dod02g3015 311 CDD retinol-DH_like_SDR_c_like 23 303 - -
Dod02g3015 311 PANTHER RETINOL DEHYDROGENASE 3 311 - -
Dod02g3015 311 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Dod02g3015 311 PRINTS Glucose/ribitol dehydrogenase family signature 216 233 IPR002347 -
Dod02g3015 311 PRINTS Glucose/ribitol dehydrogenase family signature 25 42 IPR002347 -
Dod02g3015 311 PRINTS Glucose/ribitol dehydrogenase family signature 101 112 IPR002347 -
Dod02g3015 311 PRINTS Glucose/ribitol dehydrogenase family signature 192 211 IPR002347 -
Dod02g3015 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3015 Dod-Chr2 63764321 63768759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3015 27 281 Acyl Lipid Metabolism Gene Families AT3G55290 26.966 6.65e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3015 - - cam:101490020 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3015 02 63764321 63768759 Dod02g3015 02 63764321 63768759 ECH