Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2946 ATGGCTTCGAAACCACAAGCACTGGCCTTCCTCCTCTTTGCCCTCTCCACGCTTTCTTTGATCATCAATACCTCTCATGCCGCTGACACTCCGGTGATTGCCGTCTACTGGGGCCAAAACGGAAACGAAGGCACTTTGCAAGCAGCATGTGCTTCACAAAACTACGGCATCGTGATCCTCGCTTTTCTTAATGTGTTTGGCAGTGGCAGGACCCCACAATGGAACTTTGCTGGCCATTGTGGCGATTGGAGCCCGTGCACCAGACTAGCCCCAGAAATTCAATACTGCCAAAGCCTTAACATCAAGGTTTTCCTCTCCCTTGGTGGAGGCGTAGGAGACTACTCCCTTTCCTCGGCACAAGATGCTAAGGAAGTTGCACAGTACCTCTACAACAACTTCCTCAGTGGGCAATACGGTCCACTAGGAAGTGTTTCACTAGATGGAATTGACTTTGACATCGAGGGTGGCTCAAACCTCTACTATGATGACCTAGCCAAAGCCATCAATGCATTCTCCACAACAGAGAGAAAAATCTACCTAGCTGCAGCACCACAATGTCCATACCCAGATTACTACCTGGATGCAGCCATCAGAACAGGACTATTTGACTACATATTTGTTCAGTTCTACAACAACCCTCCATGCCAATACTCAAATGGCAATGCCGTCAACCTTTTGAACTATTGGGACACATGGACCGGAGCAGTTCTGCCCAACAACACCGTGCTTTTGGGGCTGCCGGCTGCCCCTAGTGCCGCGGGCAGCGGTTACGTATCTGCAGATGTTGTTAAGTCGCAGATTCTTCCCAGCATAAAGCAGACTCCTAACTATGGTGGGGTTATGCTGTGGAGCAGGTACTATGATCTTCAAACTGACTTCAGTGGTCAGATAAAGGATAGCCTTGGATCTGCATTACTGAAGTCAGTGGCAGCACTTGCTGATGCAATGTATGAGTGTGTGACTAAAACTTTGCACCGTTTGTACCATGTCCCTAAATCTGTGCCACTTAAGGGCGTGGTTTGA 1023 0.4888 MASKPQALAFLLFALSTLSLIINTSHAADTPVIAVYWGQNGNEGTLQAACASQNYGIVILAFLNVFGSGRTPQWNFAGHCGDWSPCTRLAPEIQYCQSLNIKVFLSLGGGVGDYSLSSAQDAKEVAQYLYNNFLSGQYGPLGSVSLDGIDFDIEGGSNLYYDDLAKAINAFSTTERKIYLAAAPQCPYPDYYLDAAIRTGLFDYIFVQFYNNPPCQYSNGNAVNLLNYWDTWTGAVLPNNTVLLGLPAAPSAAGSGYVSADVVKSQILPSIKQTPNYGGVMLWSRYYDLQTDFSGQIKDSLGSALLKSVAALADAMYECVTKTLHRLYHVPKSVPLKGVV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2946 340 Gene3D Glycosidases 31 301 - -
Dod02g2946 340 CDD GH18_hevamine_XipI_class_III 33 299 IPR045321 -
Dod02g2946 340 Pfam Glycosyl hydrolases family 18 33 288 IPR001223 GO:0005975
Dod02g2946 340 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 304 IPR001223 GO:0005975
Dod02g2946 340 PANTHER ENDOCHITINASE 1 300 - -
Dod02g2946 340 SUPERFAMILY (Trans)glycosidases 29 297 IPR017853 -
Dod02g2946 340 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 146 154 IPR001579 GO:0004553|GO:0005975
Dod02g2946 340 PANTHER ACIDIC ENDOCHITINASE 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2946 Dod-Chr2 62293265 62366055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2946 1 297 Glycoside Hydrolase AT5G24090 50.333 2.72e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2946 K01183 - gmx:547449 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2946 02 62293265 62366055 Dod02g2946 02 62293265 62366055 ECH