Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2451 ATGAGCAACGTGTTTGAGGGATACGAGCGTCAGTACTGCGAGCTCTCGGCGAATCTAGCTAAGAAGTGCACTGCGGCTGCTTCTCTTAATGGAGAGCAAAAGAAGCAAAAAGTTTCTGAAATACAGGCTGGAATTAATGAAGCAGAAGCTTTGATTCGAAAAATGGACCTTGAGGCAAGAAGTTTGCAGCCAAACATCAAGGCTGCGCTTCTTGCTAAGTTGCGGGAGTATAAATCGGATCTGAACAATCTTAAAAGTGAAGTGAAGAAAATTGCATCTGGTAACTTAAACCCTTCTGCACGGGATCAGTTGTTGGAATCAGGCATGGCAGATGCTATGACGGCATCAGCTGATCAGAGATCAAGATTAATGATGTCAACTGAGAGGTTGAACAAGACTAGTGATAGGGTTAAGGAAAGTAGGAGGACAATGTTGGAAACAGAGGAGCTTGGTGTTTCCATTCTTCAAGATTTGCACTCACAGCGACAATCTCTATTGCATGCTCATGACACGGTAATCTTTGTCTTTCTTGTTTAA 537 0.4302 MSNVFEGYERQYCELSANLAKKCTAAASLNGEQKKQKVSEIQAGINEAEALIRKMDLEARSLQPNIKAALLAKLREYKSDLNNLKSEVKKIASGNLNPSARDQLLESGMADAMTASADQRSRLMMSTERLNKTSDRVKESRRTMLETEELGVSILQDLHSQRQSLLHAHDTVIFVFLV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2451 178 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
Dod02g2451 178 Gene3D - 117 174 - -
Dod02g2451 178 SUPERFAMILY SNARE fusion complex 130 173 - -
Dod02g2451 178 CDD SNARE_Vti1 127 172 - -
Dod02g2451 178 SUPERFAMILY t-snare proteins 6 92 IPR010989 GO:0016020|GO:0016192
Dod02g2451 178 Gene3D - 1 99 IPR038407 -
Dod02g2451 178 Coils Coil 67 94 - -
Dod02g2451 178 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 172 - -
Dod02g2451 178 Pfam Snare region anchored in the vesicle membrane C-terminus 128 172 - -
Dod02g2451 178 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2451 Dod-Chr2 53904948 53909557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2451 K08493 - gmx:100815385 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2451 02 53904948 53909557 Dod02g2451 02 53904948 53909557 ECH