Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2413 ATGAACTTCTCACATAAGTTAGCCGAGCTTGGATGCAAAGTCATCTTTGTGAACACAGAATTCAACCACAAGCGAATGATGGTGAATTACAAGGCCGAGCAAACACATGATGATGATACAAGCCTTGAGGATGGATCACTAATAAAGCTGGTCTCAATCCCAGATGGTTTAAGACCTGAGGATGATAGAGGCCATTTTGCGAAGCTAAATGATGCCATGTTGAGCACCATGCCTTCTATGCTTGAGAAACTCATAATTGATAGTCGTTTGAATGGTGAAATTGGAATAAGGTGCATAGTTGCTGATTTGAATATGGGATGGGCGTTGGAAGTTGCATGTAAGCTTGGAATCAAAGGAGCTCTCTTCTGGCCTGCATCTGCGGCTATGTTTGCCTTGGTCAGCAAAATCCCGAAACTAATTGATGATGGCATCATCGATTCTGATGGGGTCCCAATCATTAAAAGGACATTTCACATATCAGAAAGTATACCTTTGATGAACACAGAAAGCCTTTACTGGTCAAATGTAGCCGACCCAACAAATCTTAAGAAAATATTCAATACTATAGTGCACTGCACCGGGGCTTTAGATCTGACAGAGTGGTGGCTTTGCAACACCACATATGAACTTGAACCGGGAGCAATATCCTTTGTTCCAAAGCTCCTACCAGTTGGCCCATTATTAAGAAGTTATGACAACACAAGTTCTACTGCAAAGTCATTAGGACAATTATGGGAAGAAGATATGTCTTGCATGAGTTGGCTTAATCAGCAGCCTCATTGTTCTGTCCTATATGTTGCCTTTGGTAGTTTCACTCTTTTTGAGCAAAATCAGTTTAAAGAACTAGCTCTTGGACTTAAGCTCACAAATAGACCCTTTCTTTGGGTTGTACGTCAAGATTTCAATTGCAACAACAACAAAGTGTACTCTTACCTCGACGAATTCAACGGGAGTCAAGGTAAGATAGTGGGATGGGCTCCTCAAAAGAAGGTGCTTAGTCACCCCGCCATAGCTTGCTTTGTTAGTCATTGTGGTTGGAACTCTACCATAGAGGGTTTATCTAATGGGGTGCCCTTCTTGTGTTGGCCATATTTTGCTGACCAACTTTATAACAAAACATACATTTGTGATGAGTTGAAAGTTGGACTGGGATTTGACTCGGATGAAAATGGATTGGTGTCACGTGGGGAGATAAAAGTGAAAGTGGACCAACTGCTTGGTGCTGAGAACATAAGAGCAAGATCTCTGGAGCTAAAGGAGAAGCTAATGAACAACATAGCAGAAGGAAGTAAGTCTTCAGAGAACTTCAATCGGTTTGTCAAGTGGCTCAAAGATTAA 1338 0.4163 MNFSHKLAELGCKVIFVNTEFNHKRMMVNYKAEQTHDDDTSLEDGSLIKLVSIPDGLRPEDDRGHFAKLNDAMLSTMPSMLEKLIIDSRLNGEIGIRCIVADLNMGWALEVACKLGIKGALFWPASAAMFALVSKIPKLIDDGIIDSDGVPIIKRTFHISESIPLMNTESLYWSNVADPTNLKKIFNTIVHCTGALDLTEWWLCNTTYELEPGAISFVPKLLPVGPLLRSYDNTSSTAKSLGQLWEEDMSCMSWLNQQPHCSVLYVAFGSFTLFEQNQFKELALGLKLTNRPFLWVVRQDFNCNNNKVYSYLDEFNGSQGKIVGWAPQKKVLSHPAIACFVSHCGWNSTIEGLSNGVPFLCWPYFADQLYNKTYICDELKVGLGFDSDENGLVSRGEIKVKVDQLLGAENIRARSLELKEKLMNNIAEGSKSSENFNRFVKWLKD* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2413 445 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 441 - -
Dod02g2413 445 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Dod02g2413 445 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 249 374 IPR002213 GO:0008194
Dod02g2413 445 Gene3D Glycogen Phosphorylase B; 1 435 - -
Dod02g2413 445 CDD GT1_Gtf-like 1 430 IPR002213 GO:0008194
Dod02g2413 445 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 443 - -
Dod02g2413 445 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 441 - -
Dod02g2413 445 Gene3D Glycogen Phosphorylase B; 239 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2413 Dod-Chr2 53123263 53125831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2413 1 444 Glycosyltransferase AT3G02100 42.478 2.01e-120 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2413 - - gmx:100790752 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2413 02 53123263 53125831 Dod02g2413 02 53123263 53125831 ECH