Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1843 ATGGGCGATGTTTTGGGTCCCGATTTGATCAGTGACCTACCTCAGAGCATTATAGAGAGCATTCTGGTACAACTTCCAATTAGAGATGCTGTGAGAACTAGCATCTTATCAAGCAAATGGAGGTACAAATGGGCTTCCATTAATCAACTTGTGTTTGATGAGAAATGTGTCCCTATCTTTAATGACCGAGAAGTTGTTGAGAAGTGTGTTGTAAAGTTCATTACCAGGCTGCTGTTTCTTCACCAAGGACCAATTCATAAGTTCCAAATCACGATACCTTACTTGCAGAGCTGCCCCGAAATAGATCAGTGGATTCTCTTCCTTTCGAGGAATGATGTCAAGGAATTGGTTCTTGAATTAGGAGAAGGTGAATTTTTCAGAATACCTTCCTGCCTTTTCAACTGTAAGAAACTGACCCGCCTTGAGCTTTTCCGCTGCGAATTGGATCCGCCCCTTACATTCAAGGGATTTATGTGTTTGAAGAGCCTAAACCTTCATCAAGTTTTGATATCCCCAGATGCGATTGAGGGCCTGATTTCCAGCTGCCCTCTTCTGGAGAGCTTATCGCTGTCTTACTTTGACAGTTTAGCTCTTAGTATCTGTGCTCCAAACCTCAAATACTTGTATCTTGAAGGTGAATTCAGGGATATATGTCTTGAAGATACTCCACTTCTGATTGAGATATCAGTTGCTATGTATATGACTGATGACATTGCTGAGCACTTTGAGCAAAGCTTAAATTGCAATTTTGTCAAGTTTCTTGGTGGTGTACCTAATCTTGAGAGGCTTGTTGGGCATATCTACTTCACAAAGTATTTGAGCATAGGTAATGACCCAGGGCATCTTCCAATAATGTACAACTATTTGGAGACTATTGAATTATATCAAGTAAGTTTTGAAGATATGAAAGAGATACTTGTCGTTCTTCGCTTGATTACCAGCTCTCCCAATCTAAAGGAGCTTCAAATTTCAGGTTCATCAAACATACCAACTGCCACAGATGCCCCAGATTTGGATTTTTGGGGAAAAGAATGCCCTTCGAGTTCAACACTTAGCCAGCTTAAAGTTGTGAAGTTGACAGACATGTGTGGAGTGCCACATGAGATGGAACTCATCAAATTTTTGCTTGGCTGTTCTCCTGTGCTTGAGATAATGAACATCACTCCTTGTGTATCTGTTGTGGATAGTCAATTGAAAATGTTGATCGAATTGGTGAAATTTCGAAGAGCTTCTGCCAAAGCAGAAATTGTTTTCGTCCGCGAGTAA 1266 0.4076 MGDVLGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASINQLVFDEKCVPIFNDREVVEKCVVKFITRLLFLHQGPIHKFQITIPYLQSCPEIDQWILFLSRNDVKELVLELGEGEFFRIPSCLFNCKKLTRLELFRCELDPPLTFKGFMCLKSLNLHQVLISPDAIEGLISSCPLLESLSLSYFDSLALSICAPNLKYLYLEGEFRDICLEDTPLLIEISVAMYMTDDIAEHFEQSLNCNFVKFLGGVPNLERLVGHIYFTKYLSIGNDPGHLPIMYNYLETIELYQVSFEDMKEILVVLRLITSSPNLKELQISGSSNIPTATDAPDLDFWGKECPSSSTLSQLKVVKLTDMCGVPHEMELIKFLLGCSPVLEIMNITPCVSVVDSQLKMLIELVKFRRASAKAEIVFVRE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1843 421 SMART 9598neu4hmm 348 419 IPR006566 -
Dod02g1843 421 PANTHER F-BOX PROTEIN-LIKE 8 397 - -
Dod02g1843 421 SUPERFAMILY RNI-like 106 391 - -
Dod02g1843 421 Pfam FBD 351 387 IPR006566 -
Dod02g1843 421 Gene3D Ribonuclease Inhibitor 94 411 IPR032675 -
Dod02g1843 421 PANTHER - 8 397 - -
Dod02g1843 421 SUPERFAMILY F-box domain 6 73 IPR036047 GO:0005515
Dod02g1843 421 ProSiteProfiles F-box domain profile. 7 41 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1843 Dod-Chr2 24963384 24964955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1843 8 215 EF-hand Containing Proteins AT5G41840 24.793 5.95e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1843 - - gmx:100781833 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1843 02 24963384 24964955 Dod02g1843 02 24963384 24964955 ECH