Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1607 ATGAGTTCGGGTGGGTACTCCGTAGAAGTTACGGGCCTGTCGCCGAAAGTCACCGAGAAAGATGTCCACGACTTCTTCGCTTTCTCTGGCGCCATTGAGCACGTTGAAATCGTTAGGTCTGGTGACTGTGCTTGTACTGCTTATGTGACATTCAGAGATGCATATTCTCAAGAAACTGCTTGCTTGCTCAGTGGAGCTACTATTTTAGATCAACGTGTATGCATAACGCGCTGGGGGCAGCATGAAGATGGATTCGATTTTTGGAACCGTCCTTCCGACAGTCATGAGGAGGAGACTGCTTCAACTACACAACATAGCAGTCAATTTGTTTACTCTGCTGGAGAAGCCATTACTGTGGCCCAAGAAGTTGTGAAGACCATGCTAGCAAAGGGATATGTTCTCAGTAAGGATGCATTAGCCAAAGCTAAAGAGTTGGATGAGTCTCATCAGGTTTCTGCCACTGCAACAGCAAGAGTTTCTGAGCTGAGCCAGAGAATTGGCCTCACCAATAAGATATCTGCAGGTGTCGAAGCTGTCAAATCTGTGGATCAGAAATATAATGTCTCTGAAACGGCCAAGGCAGCTGCATCTGCAACAGGCAGATCAGTAGCAGCAGCTGCAAACACTGTGGTAAATAGTAGCTATTTTTCAAAGGGAGCCTTGTGGCTGTCAGGATGCTCTAACCCGAGCAGCTCAAGTTGCTTCTGA 708 0.4718 MSSGGYSVEVTGLSPKVTEKDVHDFFAFSGAIEHVEIVRSGDCACTAYVTFRDAYSQETACLLSGATILDQRVCITRWGQHEDGFDFWNRPSDSHEEETASTTQHSSQFVYSAGEAITVAQEVVKTMLAKGYVLSKDALAKAKELDESHQVSATATARVSELSQRIGLTNKISAGVEAVKSVDQKYNVSETAKAAASATGRSVAAAANTVVNSSYFSKGALWLSGCSNPSSSSCF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1607 235 SUPERFAMILY RNA-binding domain, RBD 5 78 IPR035979 GO:0003676
Dod02g1607 235 Gene3D - 2 83 IPR012677 -
Dod02g1607 235 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 226 - -
Dod02g1607 235 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 226 - -
Dod02g1607 235 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 71 IPR000504 GO:0003723
Dod02g1607 235 SMART rrm1_1 7 77 IPR000504 GO:0003723
Dod02g1607 235 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Dod02g1607 235 CDD RRM_Vip1_like 8 76 IPR034360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1607 Dod-Chr2 19886537 19888662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1607 - - gmx:100805907 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1607 02 19886537 19888662 Dod02g1607 02 19886537 19888662 ECH