Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1577 ATGATGGAACAACATCAACAACGGAAACACGCAGAGAACGAAGACGATAAGGATCATCGACCACAACAACAACGACTATGGAGTTGGGGTGCTGGAACCGAGGGTCAGTTAGGAACGTGCAGGCTTCAAGACGAGCACCTCCCTCAGCTCCTTCGACAACCCTTTCTCTCTCTCTCTTCCATCTCCTCCCTCGCCTGCGGCGGCGCCCACGTCATCGCCTTGACCTCCGGTTGGAAGGTGCTGTCTTGGGGTAGGGGCAGTTCTGGGCAACTAGGTCATGGAGAGGTTGTTAATAACGCATTGTATCCTACGCCTGTAACATCCTTGGACGGTTACTTCATAACCAATGTCTCTGCTGGTTGGAGCCACTCGGGTTTTGTTTCAGATACTGGGTGCCTGTTCACTTGTGGGGATGGCTCATTTGGCCAGCTTGGGCACGGTGATTATGCCTCCCACTCCTCCCCTGTCAAAGTATCATGGTTTGATAATCAGGTTGTTGCACGGGTAGCATGTGGCATGCGCCATTCCCTTGTCTTGTTGAAAGATTGTTCATTCAATCAAGTTTATGGATTTGGTTCTGGGAAGCGCGGTCAATTGGGCGTGTCCGGAGACAGGATCAAATATGTTAATCTTCCTGAAGTTGTTAGTGGCTTTGAGGATGTGGAAATTGTTGATATTTCTGCAAATGGAGATCATAGTGCTGCGGTCTCTGTATCTTTGTATCTTTTTGTTGCATCAGCTGATGGGCAACTTTACACCTGGGGAAGAGGCTTCAAGGGCTTTGAAGATGCTCACTCTCCTCAACGCTTAAACTCTACGTTGAAATTTACCAAGGCCACCCTCGGATGGAACCATGCTTTAGCCTTGACTGGTAAGGGGGAAATTTATATGGTTGGTGGCAACCACCTTGGAGTGCTTAGTGATCATCAGAATATGAACCAAGCAAAGCAGTTTCCTGATTTAAGAGAAGCTAGTTTGGAGAAAGTCTCTGGCCTTGATGGAACAAAGATTGTTGATATTGCTACCGGAGCTGAGCACTCCGTCCTTGTCACAGAGAATGGAGAAATAATGACATGGGGTTGGGGAGAGCATGGTCAACTCGGTTTGGGGGATACTTGTGACAGAGTTAGTCCTGTTACAGTTATTCTCGGTCATGTTCTGGGTGATGTTGCTTCAATCAGAGTTTTCTGTGGAAGTGGTTTCACGTTTGCTATAGCCAATCCCTAG 1227 0.48 MMEQHQQRKHAENEDDKDHRPQQQRLWSWGAGTEGQLGTCRLQDEHLPQLLRQPFLSLSSISSLACGGAHVIALTSGWKVLSWGRGSSGQLGHGEVVNNALYPTPVTSLDGYFITNVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDYASHSSPVKVSWFDNQVVARVACGMRHSLVLLKDCSFNQVYGFGSGKRGQLGVSGDRIKYVNLPEVVSGFEDVEIVDISANGDHSAAVSVSLYLFVASADGQLYTWGRGFKGFEDAHSPQRLNSTLKFTKATLGWNHALALTGKGEIYMVGGNHLGVLSDHQNMNQAKQFPDLREASLEKVSGLDGTKIVDIATGAEHSVLVTENGEIMTWGWGEHGQLGLGDTCDRVSPVTVILGHVLGDVASIRVFCGSGFTFAIANP* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1577 408 Pfam Regulator of chromosome condensation (RCC1) repeat 353 405 IPR000408 -
Dod02g1577 408 Pfam Regulator of chromosome condensation (RCC1) repeat 131 179 IPR000408 -
Dod02g1577 408 Pfam Regulator of chromosome condensation (RCC1) repeat 25 74 IPR000408 -
Dod02g1577 408 Pfam Regulator of chromosome condensation (RCC1) repeat 80 126 IPR000408 -
Dod02g1577 408 Pfam Regulator of chromosome condensation (RCC1) repeat 187 236 IPR000408 -
Dod02g1577 408 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 26 242 - -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 349 370 IPR000408 -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 61 74 IPR000408 -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 188 202 IPR000408 -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 25 41 IPR000408 -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 80 96 IPR000408 -
Dod02g1577 408 PRINTS Chromosome condensation regulator RCC1 signature 282 300 IPR000408 -
Dod02g1577 408 PANTHER OS01G0777800 PROTEIN 248 403 - -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 293 353 IPR000408 -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 131 182 IPR000408 -
Dod02g1577 408 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 169 179 IPR000408 -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 354 408 IPR000408 -
Dod02g1577 408 SUPERFAMILY RCC1/BLIP-II 25 237 IPR009091 -
Dod02g1577 408 PANTHER OS01G0777800 PROTEIN 26 242 - -
Dod02g1577 408 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 248 403 - -
Dod02g1577 408 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 340 350 IPR000408 -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 186 239 IPR000408 -
Dod02g1577 408 Gene3D - 3 240 IPR009091 -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 24 77 IPR000408 -
Dod02g1577 408 Gene3D - 241 407 IPR009091 -
Dod02g1577 408 MobiDBLite consensus disorder prediction 1 22 - -
Dod02g1577 408 SUPERFAMILY RCC1/BLIP-II 186 406 IPR009091 -
Dod02g1577 408 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 78 130 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1577 Dod-Chr2 19297299 19301115 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1577 - - adu:107490763 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1577 02 19297299 19301115 Dod02g1577 02 19297299 19301115 ECH