Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1576 ATGCACTCCCTCACCGCACCCTCCTACTCTTCCCTCCTCTTCTTCCCTTTGACCCCTCCCTTCCACTCTTCCCTCATCTTCTCCTTCCGCTCCACCACCACAAACACTAAGAGGATCCACGTGCTCCTGCACGTGCACGAAGGGAAGAAGAAAACCCTCAGGAAGAACAAGGGGAAGGGTTTGTGCTGCAACAAGGACTGGGACAGCGCAAGCGAGGAAGAGGAGGGAGCAGGAGGAGGAGGGTTCTCTCCTCTGGAGGCAGAGATTCTGGAGTTCATGAAGAGCTCCAAGAACCCGCTAGCGTTTCCCACGAGGGAGGAGCTGGTGGCTGCTGGGAGGGTCGATTTGGCTGAGGCCGTTGTGAAGAGAGGAGGGTGGCTTGCTTTTGGGTGGGATTTGGATCGTGGGTCACGTGAAAGTCACGATTTTGACGGTGGGTTTGGCGGTGCGGTTGCTGATGGAATTGCAGCAGCAAGGGCTTCTTCTGGGGTTGCTTCTTCCTCTTCTTGTTCTTCTTTTGATTCTGATTCTGAGGGTAACTCTCGTCAACCGGCTAGATCAGTGGAAATTGAAGCCCATGAGTCTGGCATTGAGGGTATATTGAGTCGGCTGGAGAAAGAGAGAAGTAGTTCTTTTGGACTTGGGTTCAGAGAGAAAGAAGAAAGTGTTTCTTCCGAAAATAATGAAGATAAAGATGAATGGGGTTGTAGAACTACAGTTGATGCGGTAGCTGCTGACCTTAGAAATAGTAGCAGACCTTCCTTATCGAGCCCAACAAGCAGTCCTCTTGGTGATTCCCATACCAAACTTGATCGGCATAGATCTCATTTAGGTGCTGATAATGTACAAAATTCACTTAAGCCAGACATGTGGAGGAGTTGGATTGTTCAGAGGACTGGTTTTTCAGATGCAGACTTCGAAGATGCTGAAATTGTTCCAAATGAAACTCAGAAAGGAGGTGAGGGTAATGTTTGTGGAGGACATAATATCCTCGAAAGAAGAGAGTTTTCCAGCGAACCTGTAAACAGAGAAACAGGATTAGGTTCTCTTGATGGAAATGCAAATCACAGTGAAATAAAATATCGTATCAAGCATCTGGAGTCAGAGCTGTCCTCTGTACTTGACTCATTGAGATCTAAATCTGATAAAGTTACAATGCAGATGGATCAGAAGAGCTCTTCTGATGATCTAGCAAAGCTTTCCGATGCCTGGGAATTCCAGGAAAATGAGATCATGAATGCTCAGGACAAACTGCGTTCAATACGTGCTAAGTTGGCAGTATTAGAAGGAAAGATGGCATTGGCAATAATGGATGCACACAAAATTGTTGAAGAGAAGCAGAAGAGGATTAATAATGCCCAGAGAGCTTTGCGAGTTCTGAAGACTGCTTGTGTAGTTTGGCCTAATAAAGCTTCAGAAGTATTTTTAGCAGGATCATTTGATGGTTGGTCCACCCAGAGAAAGATGGAGAAATCCAGTACTGGTATATTTTCTGTATACTTGCAGCTGTATCCTGGAAAATATGAGATCAAGTTCATTGTTGATGGTGAATGGAAAATTGATCCGTTGCGGCCTGTTGTTAACAATAATGGATATGTAAATAATCTCCTCATGATTCATGATTGA 1626 0.4545 MHSLTAPSYSSLLFFPLTPPFHSSLIFSFRSTTTNTKRIHVLLHVHEGKKKTLRKNKGKGLCCNKDWDSASEEEEGAGGGGFSPLEAEILEFMKSSKNPLAFPTREELVAAGRVDLAEAVVKRGGWLAFGWDLDRGSRESHDFDGGFGGAVADGIAAARASSGVASSSSCSSFDSDSEGNSRQPARSVEIEAHESGIEGILSRLEKERSSSFGLGFREKEESVSSENNEDKDEWGCRTTVDAVAADLRNSSRPSLSSPTSSPLGDSHTKLDRHRSHLGADNVQNSLKPDMWRSWIVQRTGFSDADFEDAEIVPNETQKGGEGNVCGGHNILERREFSSEPVNRETGLGSLDGNANHSEIKYRIKHLESELSSVLDSLRSKSDKVTMQMDQKSSSDDLAKLSDAWEFQENEIMNAQDKLRSIRAKLAVLEGKMALAIMDAHKIVEEKQKRINNAQRALRVLKTACVVWPNKASEVFLAGSFDGWSTQRKMEKSSTGIFSVYLQLYPGKYEIKFIVDGEWKIDPLRPVVNNNGYVNNLLMIHD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1576 541 MobiDBLite consensus disorder prediction 249 265 - -
Dod02g1576 541 Pfam Glycogen recognition site of AMP-activated protein kinase 465 540 IPR032640 -
Dod02g1576 541 MobiDBLite consensus disorder prediction 165 184 - -
Dod02g1576 541 MobiDBLite consensus disorder prediction 215 237 - -
Dod02g1576 541 Coils Coil 397 431 - -
Dod02g1576 541 SUPERFAMILY E set domains 463 540 IPR014756 -
Dod02g1576 541 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 36 540 - -
Dod02g1576 541 MobiDBLite consensus disorder prediction 165 192 - -
Dod02g1576 541 MobiDBLite consensus disorder prediction 215 283 - -
Dod02g1576 541 CDD E_set_AMPKbeta_like_N 465 525 - -
Dod02g1576 541 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 36 540 - -
Dod02g1576 541 Coils Coil 436 463 - -
Dod02g1576 541 Gene3D Immunoglobulins 459 541 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1576 Dod-Chr2 19291635 19297038 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1576 - - gmx:100814629 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1576 02 19291635 19297038 Dod02g1576 02 19291635 19297038 ECH