Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1559 ATGAAGAGGGGGAAGCTAGACCCACCACCGCCATTCATGCTACCGAACAGGCTCACACTGCTTCAAGTTTTCATGGCGGTGATGCTCCTCTACCTCCTCTTCATGACCTTCGAAATCCCTCTCTTCTTCAGGGCAGGCTTCTTTTCCGTCTCCACCGAAAAAGCCGCAACCTTTGGCCTCCTCACCGACGCATTGCCGGTCCCACTCATGGAACCCGATCACTCGACCCGACCCGAAAACAAGAATCCCTTTCGTGTCCCCAAACAGGTCTCCACCTTGAGCTTTAACGACAGCTTCAACGGCGAGTTCTCGGAGCTCCACAAGGTCGCGAAGCAAGCGTGGGTCGCGGGAAGAAGCCTCTGGGAAGAACTCGAAAGCGGTAAAATTGAAAACCTTGTTCGGAACCGGGTCGAAAACGGGTCGGACTCGTGTCCGAACTCGGTTTCGGTTTCTGGGTCGGAGATCAGTGATGGGGTGATGGTGTTGCCGTGTGGGCTAACGCTTTGGTCGCACGTGACCGTTGTCGGGACGCCGAGGTGGGCGCACGCGGAGAGGGACCCGAAGATCGCGGTGGTGAAGGAAGGGGAGGATGCGGTTCTGGTGTCGCAGTTTAAGATGGAGCTACAAGGGCTGAAGGCCGTGGAGAACGAGGAGCCGCCGAGGATTCTGCATTTCAATCCGAGGTTGAAAGGGGATTGGAGTGGGAAGCCTGTGATCGAGCAGAACACGTGTTACAGGATGCAGTGGGGTTCTGCGTTAAGGTGCGAGGGATGGAAGTCACGTGCCGATGAGGAAACCGTTGATGGGCAGGTGAAGTGTGAGAAGTGGATTCGTGATGATGACAGCCGGTCGGAAGAATGGAAGGCGACATGGTGGTTGAACAGGCTGATTGGGCGTAAAAAGGAGGTGAATATAGACTGGCCATACCCTTTTGCTGAGGGGAAATTGTTTGTTCTTACATTGAGTGCTGGCTTGGAAGGCTACCATATTAGTGTGGATGGGAGGCATGTGACATCCTTTCCTTATCGAACGGGCTTTGCTCTTGAGGATGCTACTGGACTATCCGTAAATGGGGACATTGATGTGCACTCGATATTTGCTGCGTCATTACCCACTTCACATCCTAGCTTTGCTCCGCAGATGCATCTTGAGTTGCTTCCACAATGGAAATCTCCTCCTCTTCTCAATGTGAATGTGGAGCTTTTTATTGGTATCCTTTCTGCTGGCAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGATGCAGCATAAACTCATCAAATCTTCACACGTTGTGACTCGGTTTTTTGTAGCATTGCATGGAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGCGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCGCACAGTAGCTGCCAAGTATATCATGAAGTGCGATGATGACACATTTGTCAGAGTGGATTCCATCATAAGCGAAGCAAGACAAGTTCCAAGTGATAGAAGTCTCTACATGGGAAATATGAATTATCACCACAGACCTCTTCGCCATGGCAAATGGGCTGTATCATATGAGGAATGGCTAGAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGTTACATAGTCTCATCTGACATTGCTCAGTTCATTGTTTCTGACTTTGAGAAGCGTAGACTGAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTAGAGCAGTTCAACAGCACAAGACTGGTAGAGTATGTCCACAGCTTGAAGTTCTGCCAATTTGGATGCATAGAAGATTACTACACCGCACATTACCAATCTCCGCGACAAATGACTTGCATGTGGGATAAGTTGCTACAGCAGGGAAAACCAGTCTGCTGCAACATGAGATGA 1944 0.4918 MKRGKLDPPPPFMLPNRLTLLQVFMAVMLLYLLFMTFEIPLFFRAGFFSVSTEKAATFGLLTDALPVPLMEPDHSTRPENKNPFRVPKQVSTLSFNDSFNGEFSELHKVAKQAWVAGRSLWEELESGKIENLVRNRVENGSDSCPNSVSVSGSEISDGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVKEGEDAVLVSQFKMELQGLKAVENEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGQVKCEKWIRDDDSRSEEWKATWWLNRLIGRKKEVNIDWPYPFAEGKLFVLTLSAGLEGYHISVDGRHVTSFPYRTGFALEDATGLSVNGDIDVHSIFAASLPTSHPSFAPQMHLELLPQWKSPPLLNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVTRFFVALHGRKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDSIISEARQVPSDRSLYMGNMNYHHRPLRHGKWAVSYEEWLEEEYPTYANGPGYIVSSDIAQFIVSDFEKRRLKLFKMEDVSMGMWVEQFNSTRLVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLLQQGKPVCCNMR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1559 647 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 13 647 - -
Dod02g1559 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 160 366 IPR013320 -
Dod02g1559 647 Gene3D - 394 634 - -
Dod02g1559 647 Pfam Galactoside-binding lectin 159 366 IPR001079 GO:0030246
Dod02g1559 647 Gene3D - 191 366 - -
Dod02g1559 647 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 158 368 IPR001079 GO:0030246
Dod02g1559 647 SMART Gal_bind_lectin_2 162 367 IPR001079 GO:0030246
Dod02g1559 647 CDD GLECT 162 366 IPR001079 GO:0030246
Dod02g1559 647 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 13 647 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod02g1559 647 Pfam Galactosyltransferase 414 594 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1559 Dod-Chr2 18973519 18977744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1559 21 647 Glycosyltransferase AT1G74800 63.359 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1559 K20843 - gmx:100803219 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1559 02 18973519 18977744 Dod02g1559 02 18973519 18977744 ECH
Dod02g1559 02 18973519 18977744 Dod02g1559 02 18973519 18977744 PCT