Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1558 ATGGAGCCGTCACGATTCACGACTCCAAGAGGATCTACGTCGTCCAGCATAGGAGACTCCTTTGAGTTTGAGGACGCCAATCTCACACTCAGTGATAGGCTCAAGGTTTTCAAAAGTTCCACCTTTGATCCCAATTCCTATGTCGCCGCCAAATCTCGCAGCATGAATGAGAAGGAGATAAGACACTTGTGCGCTTATCTTGTTGACCTGAAGAAGGCTTCTGCGGAAGAAATGCGCAGAAGTGTTCTTGCTAATTACTCAGCTTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTTCTTTCAATGAGAAATCTTCTATCCACACAGGCTGCTTTAGTTCATGGTTTAGCAGATGGGTGTCAGCTTAGTTCATTGATTACGAGAAATGAAGATTCAGAGATGGATGATATACTAGGTGAAAAAACAGATCTATCCCAGACAGAGAAATGGCTGATAGGATTTCTAGAAACTCTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCATTGGATGAAGGAGAAAAAATGTCAGAAGAAATCAGCAAAGAGAGAACTTTGAGTTCAAGTTTATTCCAGGCATTGCAAGAGGCTATAACTGAACAGAGGAAAAAATTGGCTGATCAGCTAGCAAAAACTATCTGCCAGGCATCGACTCGCAGTTCTGAGATTCGGTCGACGGCGTTGGCATTGAAGAAGCTTGGGGATGGTCCTCGTGCACATACATTGCTGCTTATTGCTCACCAAGAAAAATTGCAGCGCAACTTGCAAAGTCTTTGCTCAACTTCTAATGGAGGAGTTGGGGCTAACACTACTACCATTTCACAGCTTGTCTTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGACAGTTTTTGGTGAAGAGGAACCTGCATATACTTCTGAGCTAGTGACTTGGGCTGTAAGACAAGCCGAACGTTTCGCTCTTCTCCTTAAGAAGCGTATTCTCGCCTCAACTGCTGCTGCAGGAGGTCTCAGGATTGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGTTATCTGTTAGAGGCTAATGGGCTGGCTGTTTCCCCTGTCTTGCTAAGACATTTTAGGCCCTTTGTTGAGCAAGCATTGAACACTAATTTGAAGAGAATTGAACAAAGCAGTGCTGCATTGGCTGCTGCAGATGACTGGTTGCTTGCTCATGCACCAGTCACCAGGAATTCAGGCCACCCTCCAGTTCCTCTAATTTCTTCACTCCAGCCAAAGCTTTCAAGCAGTGCTCACAAATTCAACTCAATGGTTCAGGAGCTTTTCGAAGATGTAGGACCTCTTGAGATCCTGCAGTTGGATGGTCTTGCATTGGAAGGCCTTCTACAGGTGTTCAACTTCTATATCAATCTGCTAATAAATGCATTGCCAGGTTCTGTGGTAACTGAGAACTTGGAAGGTTCAGGGCACAAAATTGTTAAGATTGCTGAGACTGAAGCACAACAGATAGCACTGCTGGCTAATGCAATATTGCTAGCAGACGAGCTACTACCGCGAGCTGTTGTGAAACTTTCACACAGCACCAAAGGTGATGAGTCTCAGAGAAGAGGATTAGACAAGCAACATAGGCCTCCTGAACAACGCGAACTAAAGAAAAGGCTCCAACGCGAAGTTGATCGCCTAAGAGACAGCTTTTGTAGGCAGCATGCCCTTGAGCTCATCTTCACAGAAGAAGGTGATACACGTCTGGACGCAGTTATATATTTGGGTATGGAAGGAAAAGGAGAGCAACCTGAATGGTTTCCTTCTCCAATCTTTCAGGAGCTTTTCGCAAAGCTTACTCGAGTAGCAAGCATTGCAACAGATATGTTTGTGGGAAGGGACAGGTTCGCCACTATTTTGTTGATGAGACTTGCAGAAACTGTGATCTTGTGGCTTTCTGATGACCAAGCCTTCTGGGAGGAGGTGGATACAGGTCCAACGCCTTTGGGTCCTCTTGGCCTTCAACAGCTTTATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGTCGTTACTTATCCCGTCATCTGCACCAAGCTATTAAAAACATTATTGCTAGGGCTATTGATGCTGTTGCGGCTACAGGACTTGATCCCAACAGTGTCTTGCCAGAGGATGAATGGTTTGTTGAAGTTTCTCAAATAGCTATAAAGATGTTAACTGGGAAAGCTGCCTTTGACAACGTAGAGGAAGATGTTGGTAGCCCCACTACCTTTGGCTAA 2265 0.4455 MEPSRFTTPRGSTSSSIGDSFEFEDANLTLSDRLKVFKSSTFDPNSYVAAKSRSMNEKEIRHLCAYLVDLKKASAEEMRRSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADGCQLSSLITRNEDSEMDDILGEKTDLSQTEKWLIGFLETLEVLLAEKRVDEAMAALDEGEKMSEEISKERTLSSSLFQALQEAITEQRKKLADQLAKTICQASTRSSEIRSTALALKKLGDGPRAHTLLLIAHQEKLQRNLQSLCSTSNGGVGANTTTISQLVFSTISQAASDSLTVFGEEEPAYTSELVTWAVRQAERFALLLKKRILASTAAAGGLRIASECVHVCMSHCYLLEANGLAVSPVLLRHFRPFVEQALNTNLKRIEQSSAALAAADDWLLAHAPVTRNSGHPPVPLISSLQPKLSSSAHKFNSMVQELFEDVGPLEILQLDGLALEGLLQVFNFYINLLINALPGSVVTENLEGSGHKIVKIAETEAQQIALLANAILLADELLPRAVVKLSHSTKGDESQRRGLDKQHRPPEQRELKKRLQREVDRLRDSFCRQHALELIFTEEGDTRLDAVIYLGMEGKGEQPEWFPSPIFQELFAKLTRVASIATDMFVGRDRFATILLMRLAETVILWLSDDQAFWEEVDTGPTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIARAIDAVAATGLDPNSVLPEDEWFVEVSQIAIKMLTGKAAFDNVEEDVGSPTTFG* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1558 754 Gene3D - 144 264 IPR042561 -
Dod02g1558 754 SUPERFAMILY Cullin repeat-like 145 380 IPR016159 -
Dod02g1558 754 Gene3D - 278 378 IPR042560 -
Dod02g1558 754 Pfam Exocyst component 84 C-terminal 153 362 IPR032403 -
Dod02g1558 754 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 9 752 - -
Dod02g1558 754 PANTHER EXOCYST COMPLEX COMPONENT 8 9 752 IPR033961 GO:0000145|GO:0006887
Dod02g1558 754 Coils Coil 199 219 - -
Dod02g1558 754 Pfam Vps51/Vps67 37 115 - -
Dod02g1558 754 MobiDBLite consensus disorder prediction 526 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1558 Dod-Chr2 18960091 18966051 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1558 K19986 - gmx:100818886 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1558 02 18960091 18966051 Dod02g1558 02 18960091 18966051 ECH