Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1536 ATGGGCGTCGTGGCCACCAGCAGGCAATTCATGTTCCCACTCCCACCAACTCGCCACGCCTCTGTTACACTCGCTGCCACCACTCTCCCATTCCCTCTCCTGCTACGCCGTCGTTCTCTTCACCCTTCCCTCCGATTCCGACTCTCCTTCAAGTCCCCTACCTCTTCCTTTCGCGCCGTCTCTGATGCCGAGGAAGATGACGAATTGTACGAAGAGGAAGATGAGGACGAAGACGAAGACGACGACGACGTTGCGGCCGACGAGTACGACGACGTGTCCCGCGAGGTTTACGATGGCGCCGTTTCGGATGAAGGCGAAGACGCGTTCGAGGCGGCTGGGCGCGACGACGACGGGTCGTTCAAGTGGCAGAGAGTTGAGAAGCTCTGCAAAGAGGTCAGGGAGTTCGGTTCCGATATCATCGACGCCGACGAGCTCGCCTCCATTTACGATTTCCGAATCGACAAGTTCCAGCGGCTGGCGATACAAGCTTTTCTGAGAGGCTCGTCGGTCGTGGTTTCCGCTCCGACGAGCAGTGGGAAGACTCTGATTGCGGAGGCCGCAGCGGTGGCAACGGTGGCCAGGGGACGCCGGATATTCTACACGACGCCGCTCAAGGCGTTGTCAAATCAGAAGTTTCGAGAATTCCGGGTGACTTTTGGTGACAGCAATGTTGGTCTTCTAACTGGAGATTCTGCTGTCAACAAGGATGCTCAGGTTTTGATTATGACCACCGAGATTTTACGCAACATGTTGTATCAGAGTGTTGGTAATATCTCTTCTGGAAGTGGGCTCCTCCATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTCTGGGAAGAGATTGTCATTTATTGCCCTAAGGAAGTTCAACTTATTTGTCTGTCAGCAACCGTTGCAAATCCTGATGAGTTGGCTGGTTGGATTGGTCAGATTCATGGTACAACAGAATTGGTAACATCATCAAAACGCCCAGTTGCATTGACTTGGCATTTCTCTATGAAAAATTCCTTATTGCCACTTCTTGATGAGAAGGGAACACGCATGAACAGGAAGCTGTCTCTCAACTATTTACAACTTCAAGGTGCAGGAGCTAAACCTTACAAGGATGACTGGTCTAGAAAAAGGAGTTCCCGGAGACGAGGAACTCACACAAGTTATGATAGTAATGGTAGCATGTTTGAACAACGTTCTCTTTCAAAGAATGACATAAACGCAATTCGTCGTTCACAGGTTCCTCAAATAATTGATACTCTATGGCATCTTCAATCTAGGGATATGTTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCAGCTGTGCAATATCTTGAAAATTGCAAACTTTTAGATGACTGTGAAACAAGTGAGGTCGAGCTAGCCTTGAAGAGGTTCCGCATTCAGTATCCTGATGCTGTCAGAGAAACAGCTGTGAAGGGACTTCTGCAAGGGGTTGCTGCACATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATTGAAGAATTGTTCCAAAGAGGACTTGTCAAGGTTGTTTTCGCAACAGAAACCCTGGCTGCTGGAATCAATATGCCAGCTCGAACAGCTGTTATTTCATCTCTCAGCAAAAGAGGTGATAGTGGACGGATCCAACTAAGTTCAAATGAACTGCTTCAGATGGCTGGTCGTGCTGGACGCAGGGGCATTGATGATAGTGGCCATGTGGTGCTCATACAGACAACTACTGAAGGTGCTGAAGAGTGCTGCAAGGTGCTGTTTGCTGGACTTGAGCCCCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCATAGGTTGAATGAGTCAGATGACATGAGACCCTCGTCAGGGAGAACTTTAGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAATGTTATGCTGGCTGCCAAAGAGGAAGTTAATAAAATTGAGAAAGAAATTGAGTTGCTAATGTCAGAAATAACTGATGAAGCCATAGACAGAAAAAGCAGGAAGGCTTTATCACAGCAACAATACAAGGAGATTGCAGAATTACAGGAAGAATTGAGGGCAGAAAAACGTATTCGGACTGAATTGCGGAAACAGATGGAAGCAACGAGAATATCTGCCCTAAAACCTTTATTGGAAGAGCCTGAAAGTGGACATTTACCGTTTTTGTGCTTGCAGTATACAGATTCTGAAGGAGTTCAACATTCAATGCCTGCTCTTTTCTTGGGGAAGGTTGACTCCCTTAGTGCTTCAAAACTCAAGAACATGATTTCTTCTGATGATTCTTTTGCATTAAATTTAGGAGACACAGAGCCAGGTGCTACGGATTCTGAATTGAATGAAGGCCCTGAACCATCATATCATGTGGCTCTTGGTTCAGATAACTCTTGGTATCTATTTACAGAGAAGTGGATTAAAGCAGTATATGCGACTGGCTTTCCTAATGTTCCTTTGGCTCAAGGGGATGCTCTACCTCGAGAAATCATGAGTACTCTCCTTGATAAGGAGGAGATGACGTGGGACAAGCTTTCTCACTCTGAAAGTGGTGGTTTGTGGTTCATGGAAGGATCTCTAGATACATGGTCTTGGAGTTTGAATGTTCCTGTTTTGAGTAGCTTCTCCGAAAATGATGAGCTACTGCTAAAGTCCAAAGCCTACAGCGATGCCGTCGAGCGATACAAGGATCAAAGAAACAAAGTTTCACGCATGAAGAAAAAGATATCTCGTACCGAAGGATACAAGGAATACAGTAAAATCGTAGACATGGCCAAGTTCACTGAGGAGAAAATCAAGCACCTGCAGAATAGATCAAGGCGTTTGACTAATCGGATAGAACAAATTGAACCCTCTGGATGGAAGGAGTTCATGCAGGTCAGCAATGTCATACATGAAACCAGAGCTTTGGATATTAACACACAGGTCATATTTCCACTTGGTGAAACCGCGGCTGCAATCCGAGGAGAAAATGAGCTATGGCTTGCAATGGTTCTTCGCAACAAGATTTTACTAGAACTAAAACCTCCACAACTTGCTGCAGTTTGTGCAAGCGTGGTTTCTGAGGGTATCAAACTCCGACCCTGGAAAAATAACAGTTACATTTATGAACCATCCGCAACAGTATTCAATGTGATAAGGTTGTTGGATGAGCATAGAAGCGCCCTGTTATCCATTCAGGAGAAACATGGGGTGGTGATATCTTGTGGTTTGGATAGCCAGTTTTGTGGCATGGTTGAGGCATGGGCTTCAGGGCTGACTTGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGTGATCTAGCTCGACTGCTTCGAAGGACCATTGATCTGTTAGCTCAGATTCCGAAATTGCCAGATATTGATCCATTGTTGCAGCGCAATGCTAAGGCTGCAGCTGATATCATGGACCGGCCTCCAATTAGTGAACTCGCTGGGTAG 3510 0.4587 MGVVATSRQFMFPLPPTRHASVTLAATTLPFPLLLRRRSLHPSLRFRLSFKSPTSSFRAVSDAEEDDELYEEEDEDEDEDDDDVAADEYDDVSREVYDGAVSDEGEDAFEAAGRDDDGSFKWQRVEKLCKEVREFGSDIIDADELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRVTFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNISSGSGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGTTELVTSSKRPVALTWHFSMKNSLLPLLDEKGTRMNRKLSLNYLQLQGAGAKPYKDDWSRKRSSRRRGTHTSYDSNGSMFEQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDDCETSEVELALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRIQLSSNELLQMAGRAGRRGIDDSGHVVLIQTTTEGAEECCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRLNESDDMRPSSGRTLEEARKLVEQSFGNYVSSNVMLAAKEEVNKIEKEIELLMSEITDEAIDRKSRKALSQQQYKEIAELQEELRAEKRIRTELRKQMEATRISALKPLLEEPESGHLPFLCLQYTDSEGVQHSMPALFLGKVDSLSASKLKNMISSDDSFALNLGDTEPGATDSELNEGPEPSYHVALGSDNSWYLFTEKWIKAVYATGFPNVPLAQGDALPREIMSTLLDKEEMTWDKLSHSESGGLWFMEGSLDTWSWSLNVPVLSSFSENDELLLKSKAYSDAVERYKDQRNKVSRMKKKISRTEGYKEYSKIVDMAKFTEEKIKHLQNRSRRLTNRIEQIEPSGWKEFMQVSNVIHETRALDINTQVIFPLGETAAAIRGENELWLAMVLRNKILLELKPPQLAAVCASVVSEGIKLRPWKNNSYIYEPSATVFNVIRLLDEHRSALLSIQEKHGVVISCGLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQRNAKAAADIMDRPPISELAG* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1536 1169 CDD SF2_C_Ski2 416 584 - -
Dod02g1536 1169 Coils Coil 696 723 - -
Dod02g1536 1169 SMART DSHCT_2 994 1168 IPR012961 -
Dod02g1536 1169 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 161 325 IPR014001 -
Dod02g1536 1169 Coils Coil 910 930 - -
Dod02g1536 1169 Coils Coil 661 681 - -
Dod02g1536 1169 SMART ultradead3 149 339 IPR014001 -
Dod02g1536 1169 Gene3D - 115 332 IPR027417 -
Dod02g1536 1169 Coils Coil 947 967 - -
Dod02g1536 1169 SMART helicmild6 486 572 IPR001650 -
Dod02g1536 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 584 IPR027417 -
Dod02g1536 1169 Pfam DSHCT (NUC185) domain 998 1164 IPR012961 -
Dod02g1536 1169 MobiDBLite consensus disorder prediction 58 84 - -
Dod02g1536 1169 Gene3D - 333 603 IPR027417 -
Dod02g1536 1169 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 45 1165 - -
Dod02g1536 1169 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 419 618 IPR001650 -
Dod02g1536 1169 MobiDBLite consensus disorder prediction 375 401 - -
Dod02g1536 1169 MobiDBLite consensus disorder prediction 64 84 - -
Dod02g1536 1169 Pfam DEAD/DEAH box helicase 156 308 IPR011545 GO:0003676|GO:0005524
Dod02g1536 1169 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 45 1165 - -
Dod02g1536 1169 Gene3D - 950 1161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1536 Dod-Chr2 18601984 18609815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1536 K26077 - gmx:100780908 1806.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1536 02 18601984 18609815 Dod02g1536 02 18601984 18609815 ECH