Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1535 ATGGAGTCCGCCACCACCCGCCGCGACTGCATCATCACCGCCTACCGCGACCACTGCATCTTCCTCTCCCGCGGCGGCTCCCTCCTCGAGGTCTTCGCCGAGCTCATGGGCCGCGCCGCCGGCTGCTCCAGGGGCAAGGGCGGTTCCATGCACTTGTACCGCAAAGAGGCCCGATTTTTCGGTGGCCACGGCATCGTCGGAGCTCAGGTGCCGCTAGGTTGTGGGTTGGCGTTTGGACTGAAGTACTCGAAGGAGGAGAATGTGGCGTTTACTTTGTATGGTGATGGTGCTGCCAACCAGGGGCAGTTGTTTGAGGCGCTTAATATTGCGGCGCTTTGGGACCTGCCTGCCATCTTGGTCTGCGAGAATAATCACTATGGGATGGGGACGGCGGAGTGGAGGGCTGCTAAGAACCCTGCTTATTACCAGCGTGGTGATTATGTTCCTGGGTTGAAGGTTGATGGCATGGATGTTCTTGCTGTGAAACAAGCTTGCAAATTTGCAAAGGAGCATGCCTTGAAAAATGGGCCCCTTATTCTTGAAATGGACACCTACAGATATCACGGCCACTCCATGTCTGATCCTGGCAGCACATACCGTACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGAGATCCAGTTGAGAGAGTAAGAAAGCTATTATTGGCTCATGATATTGCTACAGAAAAGGAGCTAAAGGACATTGAGAAGGAAATCAGAAAAGAAGTTGATGAAGCCATTGCCAAAGCAAAGGAATCCCCAATGCCAGACCCATCTGAGTTGTTTACCAATGTATATGTTAAGGGTTTAGGAGCTGAGGTATTGATTTCTTCCCTATTCATTACTCATTATATGAATTTGAAGTACAACCAAATTTACAAATTGCTGATTTGGCTGTCTTTTCCATTGAAATTGAGTTAA 924 0.4989 MESATTRRDCIITAYRDHCIFLSRGGSLLEVFAELMGRAAGCSRGKGGSMHLYRKEARFFGGHGIVGAQVPLGCGLAFGLKYSKEENVAFTLYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYQRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPVERVRKLLLAHDIATEKELKDIEKEIRKEVDEAIAKAKESPMPDPSELFTNVYVKGLGAEVLISSLFITHYMNLKYNQIYKLLIWLSFPLKLS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1535 307 Gene3D - 1 282 - -
Dod02g1535 307 Coils Coil 230 250 - -
Dod02g1535 307 CDD TPP_E1_PDC_ADC_BCADC 1 251 - -
Dod02g1535 307 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 4 269 IPR029061 -
Dod02g1535 307 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 1 275 - -
Dod02g1535 307 MobiDBLite consensus disorder prediction 191 210 - -
Dod02g1535 307 Pfam Dehydrogenase E1 component 1 259 IPR001017 GO:0016624
Dod02g1535 307 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1535 Dod-Chr2 18589214 18600384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1535 1 274 Acyl Lipid Metabolism Gene Families AT1G24180 81.387 1.06e-176 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1535 K00161 - tcc:18609342 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1535 02 18589214 18600384 Dod02g1535 02 18589214 18600384 ECH