Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1533 ATGACAAAAGCCCACTTTTCATCAATGGGGTGCCCTTGCATTAACCCAAAACAAGTTTCATCATCCCATTTCGCCACATCTGCTTTGTCCAAACCCGGTAACACTAGCAACAAGTTTGGCTTCGCTGTGACCCCAACCAACATTGTTAATCTTCCTGGGCTTAACACATTGGGCCTTGTTTTGGTCCGTGTTGACATAGCGGGTAACCAATTTGTGCCACCTCACTCACATCCACGGGCCTCGGAAGTCACGACTTGCCTCAAGGGCCAGCTCCTTGTGGGCTTTGTGGACACAAGTAACCGTGCCTTTACACAGAACTTGAAGCCTGGTGAGTCATTTGTGTTCCCAAAGGGCCTCATTCATTTCCTCTACAATTTGGACTCTAAGGAACCAGTGTTGGCCTTGTCTGGTCTCAACAGCCAGAACCCAGGTGCACAAATAGCATCAGTTGCAATATTTGCTAGTAAGCCTCCCATTCCTGAAGCAATACTTGCCAACGCCTTCCAAATCAGCCCCCAAGAAGTGGAAGAAATACGCAAAAAACTTGGAGGGTGA 555 0.4811 MTKAHFSSMGCPCINPKQVSSSHFATSALSKPGNTSNKFGFAVTPTNIVNLPGLNTLGLVLVRVDIAGNQFVPPHSHPRASEVTTCLKGQLLVGFVDTSNRAFTQNLKPGESFVFPKGLIHFLYNLDSKEPVLALSGLNSQNPGAQIASVAIFASKPPIPEAILANAFQISPQEVEEIRKKLGG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1533 184 SMART Cupin_1_3 27 176 IPR006045 -
Dod02g1533 184 SUPERFAMILY RmlC-like cupins 18 182 IPR011051 -
Dod02g1533 184 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1 6 183 - -
Dod02g1533 184 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 6 183 - -
Dod02g1533 184 Pfam Cupin 29 175 IPR006045 -
Dod02g1533 184 CDD cupin_OxOx 10 182 - -
Dod02g1533 184 Gene3D Jelly Rolls 1 184 IPR014710 -
Dod02g1533 184 PRINTS Germin signature 75 95 IPR001929 GO:0030145
Dod02g1533 184 PRINTS Germin signature 105 125 IPR001929 GO:0030145
Dod02g1533 184 PRINTS Germin signature 139 154 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1533 Dod-Chr2 18561744 18562865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1533 10 183 Miscellaneous Gene Families AT5G39160 45.198 3.38e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1533 - - gmx:100500154 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1533 02 18561744 18562865 Dod02g1533 02 18561744 18562865 ECH