Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1484 ATGCGATGCTCTCTAGTCCGTTTCCGCCGCTACGCTAGTATCTCCTCAAAAACACCTTCCTCTCCGCTCTCTCTCCTTCTCGTCCTCCTCCGCCGCAGCAGCTGTTTCTCCTCCGCCGCCGTAACCGCCGCAATGGTACCCCACCCGAAGGACGAGGCGTACTTGAGCGCCGTCATCCCGAAGCGAATCAAGATGTTCGAGGCGATCGAGGCGGAGCAGAGAGCGCAGCGGCTCTCCCTCTCGCCGGATCCCATCAAGGTCAGCCTCCCCGACGGCAGCGTCAGGAGCGCCGCCAAGTGGCAGACGACGCCGCTCGACGTGGCCAGAGAGATCTCGAAGAACCTGGCGAACAACGCGCTCATAGCAAGGGTCAATGGCGTGCTGTGGGACATGGCGAGGCCTCTCGAGGAGGACTGCGAGCTCCGGATCTTCAGGTTCGAGGACGATGAAGGACGCGACACGTTCTGGCACTCTAGCGCTCACATTCTCGGCCAGGCGCTTGAGGTGGAGTATGGATGCAAGCTATGCATTGGGCCCTGCACTACTAGAGGAGAGGGATTCTATTATGATGCGTTTTATGGTGACTTGGGTTTGAATGAAGACCACTTTAAGCAAATTGAGGCTGCGGCATTGAAGGCTGTTGCGGAAAAACAACCCTTTGAGCGCATTGAAGTTACACGTGATCAGGCTCTTGAGATGTTTTCTGATAATAAGTTCAAGGTTGAAATTATCAATGATTTACCTTCTGACAAGACTATCACAGTATACAGATGTGGTCCCCTGGTTGATTTGTGTCGAGGACCGCATATACCTAGTACATCCTTTGTCAAAGCAATTGCATGTTTAAAGGCCTCATCAGCGTATTGGAGGGGGGACAAAAATCGGGAAAGTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTCTAAAGGAATATTTGCTTAGGTTGGAGGAGGCTAAAAAGTATGATCACAGGATTCTGGGTGTGAAACAGGAGCTTATTCTTCACCATGAGTGGAGCCCAGGAAGCTGGTTTTTTCTTCCACATGGCACACGGGTCTACAACAAATTGATGGAGTTTATTCGAAATCAGTACAGAGACCGGGGCTATCAAGAGGTTAAACTTCAGTGTCATATCCCAAATGTATTTAACATGGATCTGTGGGTGCAATCTGGTCATGCTGCAAATTATAGAGAGGATATGTTTATCTTGGAGATTGAAAAACAAGAGTTTGGGCTGAAACCAATGAATTGCCCCGGGCATTGCTTGGTCTTCAAACACAGAGTCCGCTCATATAGAGAACTTCCACTTCGTATGGCTGATTTTGGGGTTTTGCATAGGAATGAGGCTAGTGGTGCTTTGAGTGGATTGACACGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTCTGCAGGGAGTCCCAGATAAAGGATGAAGTGAGAAGTGCCTTAAATTTCATCAATTATGTCTATGACATATTTGGTTTCACATATGATCTCAAGCTTTCAACGAGGCCAGAGAAATACCTAGGAGATTTGGCAACATGGGAGAAGGCTGAAGATGCTCTTAAAGAAGCTTTGGATGAGTTTGGCATGCCTTGGCAGTTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATAGATATCAGTGTATCTGATGCCTTGAATAGGAAATTCCAGTGTGCAACTTTGCAGCTTGACTTCCAACTGCCTGATCGTTTTAAGTTGGAATACTCAGCTGAGGATGAAGCCAAAATCGAGAGACCTGTTATGATACACAGAGCCATTCTCGGATCTGTTGAGCGTATGTTTGCCATACTCTTAGAGCACTACAAGGGTAAATGGCCCTTTTGGCTTAGTCCTCGTCAAGCAATTGTATGCCCAGTGTCTGAGAAATCACAAGCTTATGCGCTGCAGGTGCGAGATCAAATCCACCATGCAGGGTATCACGTTGATGCAGATACAACTGATAGGAAAATTCAGAAGAAGGTGCGAGAGGCTCAATTAGCACAATACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACGGGACAGGTGAGTGTACGGGTTAGAGATAAGGCAGACCATACCGTAATGAGTATTGAGAACCTACTGAACCACTTCAGAGACGAAGTTGCAGCTTTCCATTGA 2172 0.4756 MRCSLVRFRRYASISSKTPSSPLSLLLVLLRRSSCFSSAAVTAAMVPHPKDEAYLSAVIPKRIKMFEAIEAEQRAQRLSLSPDPIKVSLPDGSVRSAAKWQTTPLDVAREISKNLANNALIARVNGVLWDMARPLEEDCELRIFRFEDDEGRDTFWHSSAHILGQALEVEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNEDHFKQIEAAALKAVAEKQPFERIEVTRDQALEMFSDNKFKVEIINDLPSDKTITVYRCGPLVDLCRGPHIPSTSFVKAIACLKASSAYWRGDKNRESLQRVYGISYPDQKSLKEYLLRLEEAKKYDHRILGVKQELILHHEWSPGSWFFLPHGTRVYNKLMEFIRNQYRDRGYQEVKLQCHIPNVFNMDLWVQSGHAANYREDMFILEIEKQEFGLKPMNCPGHCLVFKHRVRSYRELPLRMADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRSALNFINYVYDIFGFTYDLKLSTRPEKYLGDLATWEKAEDALKEALDEFGMPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQVRDQIHHAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKADHTVMSIENLLNHFRDEVAAFH* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1484 723 SUPERFAMILY TGS-like 85 145 IPR012676 -
Dod02g1484 723 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 351 621 IPR006195 -
Dod02g1484 723 TIGRFAM thrS: threonine--tRNA ligase 156 718 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 CDD ThrRS_anticodon 626 716 - -
Dod02g1484 723 SMART tRNA_SAD_4 253 302 IPR012947 GO:0004812|GO:0005524|GO:0043039
Dod02g1484 723 PANTHER THREONINE-TRNA LIGASE 47 722 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 PRINTS Threonyl-tRNA synthetase signature 621 633 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 PRINTS Threonyl-tRNA synthetase signature 449 472 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 PRINTS Threonyl-tRNA synthetase signature 416 444 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 PRINTS Threonyl-tRNA synthetase signature 550 578 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 PRINTS Threonyl-tRNA synthetase signature 594 607 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 Pfam TGS domain 85 144 IPR004095 -
Dod02g1484 723 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 253 302 IPR012947 GO:0004812|GO:0005524|GO:0043039
Dod02g1484 723 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 410 616 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dod02g1484 723 Hamap Threonine--tRNA ligase [thrS]. 150 721 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Dod02g1484 723 Gene3D Bira Bifunctional Protein; Domain 2 308 619 IPR045864 -
Dod02g1484 723 ProSiteProfiles TGS domain profile. 83 145 IPR004095 -
Dod02g1484 723 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 47 722 - -
Dod02g1484 723 SUPERFAMILY Class II aaRS ABD-related 614 719 - -
Dod02g1484 723 CDD TGS_ThrRS 85 150 - -
Dod02g1484 723 Pfam Anticodon binding domain 628 716 IPR004154 -
Dod02g1484 723 Gene3D - 620 722 IPR036621 -
Dod02g1484 723 CDD ThrRS_core 326 626 IPR033728 -
Dod02g1484 723 SUPERFAMILY ThrRS/AlaRS common domain 147 324 IPR018163 GO:0000166
Dod02g1484 723 Gene3D - 148 306 - -
Dod02g1484 723 Gene3D - 83 144 IPR012675 -
Dod02g1484 723 SUPERFAMILY Class II aaRS and biotin synthetases 326 613 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1484 Dod-Chr2 17727070 17735693 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1484 K01868 - gmx:100812652 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1484 02 17727070 17735693 Dod02g1484 02 17727070 17735693 ECH