Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1480 ATGAATCCCTTCTCTTCAGGGACGCGTTTGAGGGACATGATTCGGGCCATACGTGCTTGCAAGACTGCGGCAGAAGAACGTGCTGTTGTAAGAAAAGAATGTGCTGCAATTCGTGCTGCAATAAATGAAAATGATCACGATTATAGACACCGGAATCTGGCTAAGCTAATGTTTATCCACATGCTTGGCTACCCTACATATTTTGGTCAAATGGAGTGCCTCAAGTTGATAGCATCTCCCGGATTTCCAGAGAAGAGAATAGGTTACCTCGGCCTCATGTTGCTTCTCGATGAAAGACAAGAAGTTTTAATGTTGGTCACAAATTCTTTAAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCACTTTGTGCTTTAGGAAATATTTGTTCAGCTGAAATGGCTCGTGATCTTGCGCCAGAGGTTGATAGATTGCTGCAATTTCGTGATCCAAATATTCGGAAAAAGGCAGCATTATGCTCTATAAGGATCATAAAGAAAGTTCCAGACTTGGCCGAAAATTTTATCAATCCTGCTACTGCCTTACTTCGGGAGAAGCATCATGGAGTTTTGATTACTGGGGTCCAGCTTTGTACAGATCTGTGTAAAATTTGCACAGAAGCTCTTGAACATATTAGAAAGTATACGATGTCTTCATGTGAAAAACTTGTTTACAAGCTTCAACTGGGGCCAGCTTTTGTTGTAACCAAATATTTATTCAACAATTATCACAGAAATGCACGGATGGTCTGGTATGTAGCATTAAATATGCTGATGAAGGCTGTAACTGCTGATGCTCAGGCAGTGCAGAGGCACCGTGCAACAATTCTAGAGTGTGTAAAGGATTCAGATGCTTCTATTCGGAAAAGAGCGCTTGAGCTTGTTTACGTTCTGGTCAATGAAACTAACGTGAAACCCTTAGCGAAAGAGCTAATAGATTATCTAGAAGTCAGTGATAACGATTTCAGAGGGGACCTTACTGCCAAGATTTGCTCCATAGTTGCAAAGTTTTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGTATGCCTTAATTGTCGTGATAAGCAATGCTTCTGAGCTTCATGGATATACTGTAAGAGCATTATACAGGGCATTTCAAACGTCAGCTGAACAGGAAACTCTAGTTCGAGTTACAGTGTGGTGCATTGGAGAGTATGGTGACATGTTAGTCAATAATGTGGGAATGCTTGACATAGAAGATCCAATAACAGTGACTGAGTCAGATGCTGTGGATGTCGTAGAGATTGCTATAAAACGCCATACATCAGATCTTACAACAAGAGCGATGGCTTTGGTCGCCCTATTAAAGCTTTCTTCACGTTTTCCTTCATGTTCAGAGAGGATCAGAGAAATTATTGTTCAGTTCAAAGGGAGCCTCGTGCTTGAATTGCAGCAGAGAGCTATCGAATTCAATTCAATTATTGCAAAGCATCAAAATATTAGGTCTACACTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAACTTTCATTGGTAGGAAGGCTGGGTCTTTGCCGGGCACAGCTTCAACTACAACAGTACCTTCAGTTGGTATTCCAAATGGAGTAGCTAAACCTGCTGCGGCTCCACTTGTAGATCTGCTTGATCTGGGTCCAGAGGATGCTCCAGCCCCTAGTTCTTCTGGTGGCGATTTTCTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCGCAACAATCTGTTTTAGGTGCTGGTCAACCTTCAAAAAGTGGCACAGATGTTCTTTTGGATCTGTTGTCCATTGGATCACCTTCTGCTCAGAGCGGCTCATCTACAATTGACATTTTATCTTCCAGTACGAGCAACAAAGCACCAGTTTCACCATTGGATGAGCTCTCATCACTTTCACTATCTTCAAGAGCAAATTCAAATGCTGGAGCTGCTCCTATGGTGGATCTATTGGATGGTTTTGGCCCCAGCCCATCCCCAGAAAACAATGGACCAGCTTATCCATCCATAACTGCATATGAGAGCAGCTCCTTGAGGTTGACATTCAATTTTTCGAAACAACCAGGAAGCCCACAAACAACTAATATCCAGGCAACCTTTACAAATTTGTCCTCTAATGCATATACAGATTTTGTTTTCCAGGCCGCTGTTCCAAAGTTTCTTCAATTGCACTTAGATCCAGCTAGCAGCAATACTCTCGCTGCAGCTGGAAATGGGTCCATAACACAAAATTGA 2286 0.4217 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAINENDHDYRHRNLAKLMFIHMLGYPTYFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVDRLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATALLREKHHGVLITGVQLCTDLCKICTEALEHIRKYTMSSCEKLVYKLQLGPAFVVTKYLFNNYHRNARMVWYVALNMLMKAVTADAQAVQRHRATILECVKDSDASIRKRALELVYVLVNETNVKPLAKELIDYLEVSDNDFRGDLTAKICSIVAKFSPEKIWYIDQMLKVLSEAGNFVKDEVWYALIVVISNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVVEIAIKRHTSDLTTRAMALVALLKLSSRFPSCSERIREIIVQFKGSLVLELQQRAIEFNSIIAKHQNIRSTLVERMPVLDEATFIGRKAGSLPGTASTTTVPSVGIPNGVAKPAAAPLVDLLDLGPEDAPAPSSSGGDFLQDLLGVDLSPASQQSVLGAGQPSKSGTDVLLDLLSIGSPSAQSGSSTIDILSSSTSNKAPVSPLDELSSLSLSSRANSNAGAAPMVDLLDGFGPSPSPENNGPAYPSITAYESSSLRLTFNFSKQPGSPQTTNIQATFTNLSSNAYTDFVFQAAVPKFLQLHLDPASSNTLAAAGNGSITQN* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1480 761 Gene3D - 235 519 IPR011989 -
Dod02g1480 761 Gene3D - 2 232 IPR011989 -
Dod02g1480 761 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 682 761 IPR008153 -
Dod02g1480 761 PIRSF AP1_gamma 6 232 IPR017107 GO:0005794|GO:0016192|GO:0030121
Dod02g1480 761 PIRSF AP1_gamma 236 761 IPR017107 GO:0005794|GO:0016192|GO:0030121
Dod02g1480 761 SUPERFAMILY ARM repeat 25 518 IPR016024 -
Dod02g1480 761 MobiDBLite consensus disorder prediction 619 643 - -
Dod02g1480 761 Pfam Adaptin C-terminal domain 685 761 IPR008152 GO:0006886|GO:0016192
Dod02g1480 761 SUPERFAMILY Clathrin adaptor appendage domain 661 760 IPR013041 -
Dod02g1480 761 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 5 219 - -
Dod02g1480 761 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 252 760 - -
Dod02g1480 761 SMART alpha_adaptinc2 679 761 IPR008152 GO:0006886|GO:0016192
Dod02g1480 761 Pfam Adaptin N terminal region 253 503 IPR002553 GO:0006886|GO:0016192|GO:0030117
Dod02g1480 761 Pfam Adaptin N terminal region 27 207 IPR002553 GO:0006886|GO:0016192|GO:0030117
Dod02g1480 761 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 5 219 - -
Dod02g1480 761 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 252 760 - -
Dod02g1480 761 Gene3D - 667 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1480 Dod-Chr2 17662448 17675249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1480 K12391 - zju:107405640 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1480 02 17662448 17675249 Dod02g1480 02 17662448 17675249 ECH