Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1416 ATGCCCCCTCTCATTCCCCTCTGTGTTTTATTTCTCCTTCTCCAAGGTCCCCTCCCCTCCCTCTCAACCAACGTTGAAGGAAACGCTCTGCAAGCTCTGAGAAGCAGGCTTTCTGATCCCAACAACGTGCTGCAGAGCTGGGACCCAACCCTGGTTAATTCATGTACTTGGTTCCATGTTACCTGTGACTCCAACAATCGTATCATTCGCTTAGACTTGGGCAATTCTAACATTTCTGGAACCTTGGGCCCAGAACTAGGCCAGCTACGCCACCTCCAATACCTGGAGCTTTATAGGAATAACATAGCAGGAGAGATTCCTAAGGAAATTGGTAACTTGAAGAACCTTATTAGTATTGATTTGTATGGTAACAAATTCGAAGGGAAGATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATTCCTACGGCTAAACGACAACAAGCTGAGTGGATCAATCCCAAGAGAACTCACTCATCTTAAAAATCTCAAAGTCTTTGATGTTTCTAATAATAATCTCTGTGGAACAATACCTATAGATGGCAACTTCGGATCTTTCCCACCGGAAAGTTTTGAGAACAACAGACTCAATGGCCCAGAGCTGAAAGGACTGGTTCCTTATGATTTTGGATGCTGA 639 0.4397 MPPLIPLCVLFLLLQGPLPSLSTNVEGNALQALRSRLSDPNNVLQSWDPTLVNSCTWFHVTCDSNNRIIRLDLGNSNISGTLGPELGQLRHLQYLELYRNNIAGEIPKEIGNLKNLISIDLYGNKFEGKIPKSFGKLKSLKFLRLNDNKLSGSIPRELTHLKNLKVFDVSNNNLCGTIPIDGNFGSFPPESFENNRLNGPELKGLVPYDFGC* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1416 212 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Dod02g1416 212 Pfam Leucine Rich Repeat 163 194 IPR001611 GO:0005515
Dod02g1416 212 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 7 209 - -
Dod02g1416 212 SUPERFAMILY L domain-like 26 200 - -
Dod02g1416 212 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 209 - -
Dod02g1416 212 Gene3D Ribonuclease Inhibitor 22 204 IPR032675 -
Dod02g1416 212 Pfam Leucine rich repeat 90 150 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1416 Dod-Chr2 16971426 16974562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1416 7 195 Receptor kinase-like Gene Family AT1G71830 60.317 8.29e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1416 - - cpap:110810476 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1416 02 16971426 16974562 Dod06g0480 06 5897658 5904119 PCT