Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1414 ATGGCTTCCTCTTCTTCTCAGCTGGAGCGTTTGCCAGAAGAAGATTACGATCAAATCTATTGGTCGGAATCAGGTTGGGTGGAAGCTCGAACTTCGTGTGATCACCTGGCCTCCTTATCCCCCGATCTTACCCGCATTCCAACCCCTCATACTCCCTGCCACAGGTGCCAACACCCAAGTGAAAACTGGTTGTGTTTGTCATGTAAGGACGTGCTCTGTAGCCGTTTTGTGAATAAGCATATGCTCCAGCATTCTCGGGAAGCAAATCACTCCGTGGCGCTCAGCTTCAGTGATCTATCAGTATGGTGTTTCTCCTGTGATGCTTACTTGGATGCTCAAGTGATTCCACAACTGCGTCCTGTATATGAAGTAGCCTACATATTGAAATTTGGTGAGGCTCCACCGTTTCGAGCAATTCAACATCCTTCTGTTGGAGACAGTCAACCTGAAGCCTCTAGGTTCACGTAG 468 0.4829 MASSSSQLERLPEEDYDQIYWSESGWVEARTSCDHLASLSPDLTRIPTPHTPCHRCQHPSENWLCLSCKDVLCSRFVNKHMLQHSREANHSVALSFSDLSVWCFSCDAYLDAQVIPQLRPVYEVAYILKFGEAPPFRAIQHPSVGDSQPEASRFT* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1414 155 Pfam Zn-finger in ubiquitin-hydrolases and other protein 53 111 IPR001607 GO:0008270
Dod02g1414 155 SUPERFAMILY RING/U-box 31 123 - -
Dod02g1414 155 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 3 148 - -
Dod02g1414 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 134 IPR013083 -
Dod02g1414 155 ProSiteProfiles Zinc finger UBP-type profile. 31 131 IPR001607 GO:0008270
Dod02g1414 155 SMART Zf_UBP_1 52 101 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1414 - - cit:102611806 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1414 02 16963070 16964521 Dod02g1414 02 16963070 16964521 ECH