Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1408 ATGGGTATCCGATCGGTGTTTGACGCCGGCGACATGAAGAGGGAATTCGAGAGATGTGGTATCGACCCAAAGTTCGTTCCTATTGTGTGGAAGCACGTCATCCTCAATCTCAACCAACACAGCGATGGCGATGGCGATGGCGATGGCGATTGGGACTGGCACAAACACGTTCCCTCTTTGCCTTCACCTGCTTACTCTTTCCTTCGTTCCAACTTCAAAACCCCTCTCTCTTCCTCCCTCCACTCTGTTTTCCACTCCGCCGACAACCTCACCTCCAAGCTCCTCATCAAGCTCCATAATGGAGCTTTTGTGGAGGCTGTTATAATGAGGTATGATACACGTTTGGGAAAATATGCTGGTAAACCCCGTCCTGGTGGTCTAAGAGCAACTCTCTGTATATCTTCTCAAGTTGGTTGTAAAATGGGTTGCAAGTTCTGTGCGACTGGAAGTATGGGATTCAAGAATAACTTATCGTCCGGAGAGATCGTTGAACAATTGGTTCACGCCTCTAGTTTTTCACAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTCTGAACAACTATTCTTCCGTGGTAGAGTCTGTTCGTGTGATGACTGGATCGCCATTTCAATTGTCATTGAAAAGGATTACCATCTCAACGGTCGGCATCATTCATGCTATCAAAAAGCTTCATAATGATCTGCCTGGTTTGAACTTGGCAGTCTCACTGCATGCACCAGCCCAAGACATCCGCTGCCAGATTATGCCCGCAGCTCGTGCTTTCCCTTTGGAAAAACTGATGGACTCACTTCAAGAATATCAAAGGAACAGTCTGCAGAAAATATTGATCGAGTACATAATGCTTGATGGGGTGAATGACGAAGAGCAGCATGCCCACCAATTGGGGAAACTGCTAGAGACTTTTCAAGTGGTAGTGAACTTAATACCTTTCAACTCTATTGGCACGTTGAGTCAATTCAAACCTACTAGTGAGCAGAAAGTCTCAATATTTCAGAAGATTCTTCGGGGTACGTATAATATTCGAACAACAGTTCGGAAGCAGATGGGTCAGGACATAAGTGGTGCATGTGGACAATTGGTGGTTACCTCACGTGACAACTCTCTTGGAAATGCTGAACCACTTACTGACATAGAAGATCTTGTTAGTTAG 1158 0.456 MGIRSVFDAGDMKREFERCGIDPKFVPIVWKHVILNLNQHSDGDGDGDGDWDWHKHVPSLPSPAYSFLRSNFKTPLSSSLHSVFHSADNLTSKLLIKLHNGAFVEAVIMRYDTRLGKYAGKPRPGGLRATLCISSQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLVHASSFSQIRNVVFMGMGEPLNNYSSVVESVRVMTGSPFQLSLKRITISTVGIIHAIKKLHNDLPGLNLAVSLHAPAQDIRCQIMPAARAFPLEKLMDSLQEYQRNSLQKILIEYIMLDGVNDEEQHAHQLGKLLETFQVVVNLIPFNSIGTLSQFKPTSEQKVSIFQKILRGTYNIRTTVRKQMGQDISGACGQLVVTSRDNSLGNAEPLTDIEDLVS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1408 385 Pfam 4Fe-4S single cluster domain 138 224 - -
Dod02g1408 385 PANTHER 23S RRNA METHYLTRANSFERASE 3 375 IPR040072 -
Dod02g1408 385 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 3 375 - -
Dod02g1408 385 PIRSF Cfr 49 377 IPR004383 GO:0006364|GO:0008173
Dod02g1408 385 SUPERFAMILY Radical SAM enzymes 130 307 - -
Dod02g1408 385 ProSiteProfiles Radical SAM core domain profile. 125 354 IPR007197 GO:0003824|GO:0051536
Dod02g1408 385 Gene3D Aldolase class I 78 370 IPR013785 -
Dod02g1408 385 SFLD adenosine C2 methyltransferase (RlmN-like) 83 369 IPR004383 GO:0006364|GO:0008173
Dod02g1408 385 Pfam Radical SAM superfamily 134 292 IPR007197 GO:0003824|GO:0051536
Dod02g1408 385 CDD Radical_SAM 138 339 - -
Dod02g1408 385 SFLD Radical SAM 83 369 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1408 - - ccaj:109814608 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1408 02 16916375 16920090 Dod02g1408 02 16916375 16920090 ECH