Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1389 ATGGCTGCTGCTGCTGCACGCGATCTAAGCCTCCTTTCCCAATTTGCGATTGCTGGAAACCTTCGAGTTGGTTTCACACAAAATGGGGTTTTTCACTGCACCCCATTCTTGAACAGCAGAGAGAAATTGAAGGGAAATGTTGGGGTCAAGGTTCGTGCAGCTGTGCAAGTGGGTTCGGAGGAGGCAACAAAGAGCAAGGTTTATCCGAGCGTTTTAGAGGGGTTGGATGTGGTTTCAGAAGAGGGTTTAAGGGAGAAGGGGTTCATGGGGTTGAGGAAGACGAAGCTCGTGTGTACTATTGGGCCTGCGTGCTCCTCATTCCAGGATCTTGAGAAGTTGGCATTGGGCGGAATGAACGTTGCGAGGCTCAACATGTGCCATGGCACCAGGGAGTGGCACCGTGATGTCATCAGAAGGATCAACAAGCTGAACGAGGAGAAAGGTTTCTCTGTTTCTGTGATGATTGATACTGAGGGTAGCCAGATTCATGTTGTTGATCATGGTGCTCCTTCCTCTGTTAAAGTGGAGGAAGACTCGATTTGGCGGTTTACTGCTCAACATTTTGAGGGTTCTCGTCCATTTACCGTTCAAGCAAACTATAAGGGCTTTTCTGAAGGCATTGACGTGGGTGATGAAGTTGTTATCGATGGTGGAATGGCATGCTTTGTAGTCCTTGAAAAGACTGGAGATGATTTGCATTGCAAATGCATAGATCCTGGCCTTTTCTTACCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTGCGTAGGAATTACAAGCTCCCCACTCTATCCACAAAGGATTGGGCTGACATTGATTTTGGTATCTCTGAGGGAGTTGACTTTTTTGCCTTGTCCTTTGTCAATCATGCTGATTCTGTTGAGCATCTTAAGAACTACCTATCTACCAAATCAACCAAATCCATTAAAGTATTAGCAAAGATAGAGAGCTTAGAATCCCTTCATAATCTGAAGGAAATAGTACAAGCTTCTGATGGAATCATGGTGGCTCGTGGTGACCTCGGAGTTGAAATACCACTTGAACAGATTCCTTCAGTGCAAGAGGATATAATCAACATTTGCAGACAACTGAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTCGAGTCAATGGTTGAATATCCAACACCAACACGTGCCGAGGTAGCAGATGTTTCTGAAGCTGTTCGACAGTATGCTGATGCATTGATGTTGTCTGGTGAGTCAGCTATTGGATCATATGGACAGAAAGCTCTGGCTGTCCTAGACATGGCAAGCACTAGAATGGAATCATGGGCTCGGGAGGAAAACAAACAAAGTCATCTTATTCACCATCAACTTGGAGTATCATTACCAGATCGCGCAGCTGAGCAGATATGCAATTGTGCTGTTGAAATGGCCAACAACCTGGGTGTTGATGCCATCTTTGTGTACACAAAGCATGGATACATGGCATCGCTTCTATCACGCAACCGGCCAAATTCTCCAATCTTTGCTTTCACGAACGATGAGAGTACCCGTATGGCTCTCAATTTGCATTGGGGTGTTGTCCCCTTTAAGGTTGACTTGTTAGATGATACAGAATCCAACATCTCAAAATCCATCGAGTTTATGAAGTCTAAACGGATTGGTCACCCAAGGAGATGTTGTTTTAGTGGTGTCAGATGTTGCTCCAACGCTTGCATCTCCCATGGCTTTCCAGTCAATTCAGGTGAAGACCATTATCTAGACTCTAAAGCACCAAAATCACCTAGGCCATTGCAGGGACACCTGTCTGTCTATTATCTACTGTTGTATATCAATATTGTACTATTATACCTGCTCTAA 1833 0.449 MAAAAARDLSLLSQFAIAGNLRVGFTQNGVFHCTPFLNSREKLKGNVGVKVRAAVQVGSEEATKSKVYPSVLEGLDVVSEEGLREKGFMGLRKTKLVCTIGPACSSFQDLEKLALGGMNVARLNMCHGTREWHRDVIRRINKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSIWRFTAQHFEGSRPFTVQANYKGFSEGIDVGDEVVIDGGMACFVVLEKTGDDLHCKCIDPGLFLPGAKFSFWRDGKLVRRNYKLPTLSTKDWADIDFGISEGVDFFALSFVNHADSVEHLKNYLSTKSTKSIKVLAKIESLESLHNLKEIVQASDGIMVARGDLGVEIPLEQIPSVQEDIINICRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLDMASTRMESWAREENKQSHLIHHQLGVSLPDRAAEQICNCAVEMANNLGVDAIFVYTKHGYMASLLSRNRPNSPIFAFTNDESTRMALNLHWGVVPFKVDLLDDTESNISKSIEFMKSKRIGHPRRCCFSGVRCCSNACISHGFPVNSGEDHYLDSKAPKSPRPLQGHLSVYYLLLYINIVLLYLL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1389 610 Pfam Pyruvate kinase, alpha/beta domain 459 544 IPR015795 -
Dod02g1389 610 SUPERFAMILY PK beta-barrel domain-like 162 245 IPR011037 -
Dod02g1389 610 Gene3D - 160 264 IPR015806 GO:0004743|GO:0006096
Dod02g1389 610 PANTHER PYRUVATE KINASE 38 543 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 ProSitePatterns Pyruvate kinase active site signature. 311 323 IPR018209 GO:0004743|GO:0006096
Dod02g1389 610 Gene3D - 92 431 IPR040442 -
Dod02g1389 610 Pfam Pyruvate kinase, barrel domain 92 433 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 86 435 IPR015813 GO:0003824
Dod02g1389 610 TIGRFAM pyruv_kin: pyruvate kinase 92 545 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 SUPERFAMILY PK C-terminal domain-like 453 545 IPR036918 -
Dod02g1389 610 PRINTS Pyruvate kinase family signature 390 408 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 149 165 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 313 339 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 365 389 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 282 296 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 409 425 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PRINTS Pyruvate kinase family signature 340 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g1389 610 PANTHER PYRUVATE KINASE 38 543 - -
Dod02g1389 610 Gene3D - 432 545 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1389 Dod-Chr2 16771740 16775399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1389 K00873 - gmx:100780644 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1389 02 16771740 16775399 Dod02g1389 02 16771740 16775399 ECH