Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1096 ATGGTGAATCGACGCTTCTCTCAGGTAGCCACCAGCGACGACGACAACGAAGACAATCTCACCCTCCAACAACATTCGAAGCTTCGCAAGAGGAAGAAGATGAAGCTTCTAGAAGAAGAAGAAGAAGAAGATGACGACAATCACGACATTGACAATGACGACCAACAACAACAGCCACAGGAGGAGGAGGAAGAGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGACACCAAGGGCAAGGAAGTAGTAGTTGAGGAAACCCCTCTTGAGGACGCTAAGCCCGTCGGCGATCCGGTTAGGTTTTCCGGAAAGGGAAGAGGCAGGAGGAAGCATTACCACTCCTTCGAATTCGATGGCTTCCAATATTCACTCGAGGACCCTGTGCTTCTCGTGCCTGAGGATGGCCAAAAGCCCTATGTCGCAATTATTAAGGACATTGCACAGTCTTGCAATGGCAGCGTGATGGTGACAGGGCAGTGGTTTTATCGTCCTGAAGAAGCAGAACAACAAGGTGGAGGAAGCTGGCAATCGCAGGATACAAGGGAGCTGTTTTACAGTTTCCACCGTGATGAAGTTCCTGCTGAGTCTATCATGCATAAGTGCGTGGTGCATTTTGTTCCGGTGCACAAACAGCTCCCAAAACGTAAGGAGCATCCGGGGTTTATTGTGCAAAAGGTGTATGATACCATTGAAAAGAAACTCTGGAGACTTACTGATAAGGACTATGAGGATGTAAAACAGCAAGAAATTGATGAGCTTGTTCAGAAAACTCTACAACGTATGGGTGAACTACTTGACATTGAGATTGAAGAAGCCCCTGCAGATCAAGAAGATCTGACCAAAAATAAAAGGACAAAAAGAACTTCGCATCTTGATGTTATATGGGAGGAGGAAGGAACTCCTAATGGTGACCAGCATCTGAAGCCTGAAACACCTGGGAATTGTGTAAATGATGCCTCAGAGTATTATCGCATATTAGTTAATTTCAATGCACTGACTGGTAACACCCATCGTGACAAATGGTTGGAGAAGTTGCTTGAACACATTCATTACATGTGTAAGTCTGATGATAGCGCTGAAAGGGATGACAACAGGTTACAAAATGTAAATTTTGATGAAAATAACAATAGATGTTCAGAACCTGCAAATGACTGTCAAGACAAGGGCCAGAAGAGTTCCAAGTCTTTTATCTGGCCAGATGCTGCTGTTCCAGCTATAGTTGCACTAGAAAAAGCTTCACATGATGCCCTTTCATCAGTTCAGAAGTATAACAAAAAGCTGCGGCAATTAGGTTATAATCTCAAGACGAATGCATTGCTAGCACACCGTCTATTAAATGGAGAGCTGGAACCTTCAAAAATGTTAAATATGACACCTAATGAATTGAAGGAGGCTTGTACTGCTGAGGAAAAGGGCAAGAAAGAATCTGATGAGCCACAGCTCATGCAAGTAAATCATTTTCCCACAACAGTTTTTTTAGTCTTTGGTTGGGGATATATGCTGACTTCAGCTTTCCCACTCCTGAAACAGATGACAGATGCACGCTGCCAAAGATGCAATGAGTGTAAGGTGGGCTTGAGGCATATTATCCATGCTGGACATGGTGACCGATATCAGCTGGAATGTGTTGCCTGTGGTAATTCCTGGTATGCCTTCCGGGATGAGGTGTCTATCCTGACCATAGATGCACCGGTTTCAAAGAAGAACTTGGACACTGAACCACTGGCCACTAAAAAAGTTGAAGATTTTAAGAAGAAGCCAGTAAGCCCCAGTCAGCCTGAAAAGCAATCCCATGATGACTCGAAAACAAGTGAAGCGTGA 1833 0.4435 MVNRRFSQVATSDDDNEDNLTLQQHSKLRKRKKMKLLEEEEEEDDDNHDIDNDDQQQQPQEEEEEVKKKKKKKKKKKEEDTKGKEVVVEETPLEDAKPVGDPVRFSGKGRGRRKHYHSFEFDGFQYSLEDPVLLVPEDGQKPYVAIIKDIAQSCNGSVMVTGQWFYRPEEAEQQGGGSWQSQDTRELFYSFHRDEVPAESIMHKCVVHFVPVHKQLPKRKEHPGFIVQKVYDTIEKKLWRLTDKDYEDVKQQEIDELVQKTLQRMGELLDIEIEEAPADQEDLTKNKRTKRTSHLDVIWEEEGTPNGDQHLKPETPGNCVNDASEYYRILVNFNALTGNTHRDKWLEKLLEHIHYMCKSDDSAERDDNRLQNVNFDENNNRCSEPANDCQDKGQKSSKSFIWPDAAVPAIVALEKASHDALSSVQKYNKKLRQLGYNLKTNALLAHRLLNGELEPSKMLNMTPNELKEACTAEEKGKKESDEPQLMQVNHFPTTVFLVFGWGYMLTSAFPLLKQMTDARCQRCNECKVGLRHIIHAGHGDRYQLECVACGNSWYAFRDEVSILTIDAPVSKKNLDTEPLATKKVEDFKKKPVSPSQPEKQSHDDSKTSEA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1096 610 SMART mid_6 376 476 IPR003618 GO:0006351
Dod02g1096 610 Pfam Transcription factor S-II (TFIIS), central domain 337 480 IPR003618 GO:0006351
Dod02g1096 610 ProSiteProfiles BAH domain profile. 124 242 IPR001025 GO:0003682
Dod02g1096 610 SUPERFAMILY Elongation factor TFIIS domain 2 336 467 IPR036575 GO:0006351
Dod02g1096 610 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 514 610 - -
Dod02g1096 610 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 488 - -
Dod02g1096 610 MobiDBLite consensus disorder prediction 39 60 - -
Dod02g1096 610 Pfam BAH domain 126 238 IPR001025 GO:0003682
Dod02g1096 610 ProSiteProfiles TFIIS central domain profile. 341 494 IPR003618 GO:0006351
Dod02g1096 610 MobiDBLite consensus disorder prediction 1 109 - -
Dod02g1096 610 CDD BAH_plant_3 106 251 - -
Dod02g1096 610 Gene3D - 325 468 IPR036575 GO:0006351
Dod02g1096 610 Gene3D - 42 224 IPR043151 -
Dod02g1096 610 MobiDBLite consensus disorder prediction 580 610 - -
Dod02g1096 610 Coils Coil 60 81 - -
Dod02g1096 610 Coils Coil 22 42 - -
Dod02g1096 610 MobiDBLite consensus disorder prediction 1 17 - -
Dod02g1096 610 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 514 610 - -
Dod02g1096 610 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 488 - -
Dod02g1096 610 SMART BAH_4 124 242 IPR001025 GO:0003682
Dod02g1096 610 MobiDBLite consensus disorder prediction 374 394 - -
Dod02g1096 610 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1096 Dod-Chr2 13630384 13634830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1096 - - aip:107630794 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1096 02 13630384 13634830 Dod02g1096 02 13630384 13634830 ECH