Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1060 ATGAAAAAAACTGTCCAAGCCATGTGTCAGTTATCATCATCATCATCATCTGCCTCTACTTTCTGTGAAAGCAGTAAGGGCCAGGCAAATATATCCACAACCAAAAAATTACAGGATCCTGACGTGCTCACCCTTTTGATCCCCAAATCCCCAACATTGGAACAAAAGTACCAAAACCCACATCAGAGTAATAACAATAACAAGACCCTTCATCACTTTTCTCTGGCCCTCAATGAAGCAAAATGCATAGCACAAATAGCACTACCCATGGTGCTAACTGGCCTAGTACTCTACTCTCGCTCCGTAATCTCCATGCTCTTCCTTGGTCGCCTCGGCGAGCTTGCTTTAGCTGGTGGCTCCTTGGCCATTGGGTTCGCCAACATCACTGGCTACTCGGTTCTCTCGGGCCTTGCCATGGGTATGGAGCCCATCTGCGGCCAGGCTTTTGGGGCCAAGAGGTTCAAGCTTCTGGGCCTCACTATGCAGAGGACGGTTCTCCTCCTTCTCTTAACTTCATCCTTCATATCATTCTTATGGTTCAACATGAAGAAAATATTGCTCCTATGTGGTCAACAAGAAGACATAGCCACAGAGGCTCAATCTTTCATACTCTATTCTCTCCCTGATCTCGTGGCGCAATCGTTGCTACACCCTTTGAGAATCTACCTCCGAAGCCAATCTATAACACTGCCTCTTACCTACAGCGCGGTTCTCTCTATTCTTCTCCACGTGCCCATCAACTATTTCCTTGTCTCGGTGCTTCAGCTTGGGATCAAAGGCATAGCATTAGGCGCTGTTTGGACAAACTTCAACCTCGTGGCTTCATTAGTTGTCTATATCTGGGTCTCTGGCATTCACAGGAAAACATGGAACGGCGTCTCTTCCGCGTGTTTCAAAGGCTGGAAAACGCTCTTGAATCTGGCCGTTCCAAGCTGCATTTCAGTGTGCCTCGAATGGTGGTGGTACGAGATCATGATCTTGCTCTGCGGGTTGTTGATAAACCCGCATGCAACCGTTGCGTCAATGGGGGTGTTGATTCAAACCACGGCATTGATATACATTTTCCCTTCTTCGTTAAGCTTTGGGGTGTCCACGAGGGTTGGGAATGAGCTCGGTGCTGAGAATCCTCATAAAGCAAAACTTGCGGCAATAGTGGGGCTCTGTTTCAGCTTCGTTTTGGGGTTCTCTGCATTGGCGTTTGCTATTTCGGTGAGGAATGTTTGGGCCACGATGTTCACGCGGGATGCACAGATCATTGGGTTGACGTCTATGGTGTTGCCAATCATAGGGCTTTGCGAGCTTGGGAACTGTCCTCAGACAACGGTTTGTGGGGTTTTGAGGGGAACTGCGAGGCCTAAACTTGGTGCGAATATAAACTTGGGTTGTTTTTACCTCGTGGGGATGCCCATTGCGGTGTGGTTGGGTTTCTTTGCGGGTTTTGACTTCAAAGGGTTGTGGCTTGGACTGTTGGGTGCTCAGGGATCGTGTATGGTCACCATGATGTTCGTGTTGGCTCGCACCAATTGGGAAGGTCAAGCACAAAGAGCCAAGGAGTTAACATCATCGTCTGATCCTAGCGAAGAAGAAGCACAAGAGAAGGAGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGGGAGGAGGAAGAACGTGAACAATTCATTCTAGGTTGA 1668 0.4868 MKKTVQAMCQLSSSSSSASTFCESSKGQANISTTKKLQDPDVLTLLIPKSPTLEQKYQNPHQSNNNNKTLHHFSLALNEAKCIAQIALPMVLTGLVLYSRSVISMLFLGRLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLLTSSFISFLWFNMKKILLLCGQQEDIATEAQSFILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSAVLSILLHVPINYFLVSVLQLGIKGIALGAVWTNFNLVASLVVYIWVSGIHRKTWNGVSSACFKGWKTLLNLAVPSCISVCLEWWWYEIMILLCGLLINPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPHKAKLAAIVGLCFSFVLGFSALAFAISVRNVWATMFTRDAQIIGLTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPIAVWLGFFAGFDFKGLWLGLLGAQGSCMVTMMFVLARTNWEGQAQRAKELTSSSDPSEEEAQEKEVVVVVVVVEGEEEEREQFILG* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1060 555 PANTHER MULTIDRUG RESISTANCE PROTEIN 58 531 - -
Dod02g1060 555 Pfam MatE 89 249 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1060 555 Pfam MatE 310 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1060 555 TIGRFAM matE: MATE efflux family protein 89 486 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1060 555 CDD MATE_eukaryotic 79 515 IPR045069 GO:0042910|GO:1990961
Dod02g1060 555 PANTHER PROTEIN DETOXIFICATION 58 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1060 Dod-Chr2 13240723 13242700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1060 K03327 - gmx:100811560 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1060 02 13240723 13242700 Dod02g1060 02 13240723 13242700 ECH