LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g1029	ATGAGAGTGATAGTGCCATTGCAAGGAGTGGTTCAAGGCAGAGGAGGTCTCTTCTGGGGTTCTGTCATCCCCTGCGCCCTCTTCTACTTCCTCCAGCTCTACTTCAAGAACCGCCGCCACCCTCCTCCTCCTCCGCCACACTCCCCTCCATCCTCCCCCGACCCTGACCCCTCCTCCTCTTCCGACAAGCTTCATCCCCATGTGCCCCGCTCCCTTTCTCGGATCCTTCTGTCTCCGAGGGGCACTCCCGGATCCGCTTACGTGTCAGGTCGGGCCAGCTCCGTCACCCGAACGACCTCTGACTCCCCTTACTACGTTGGTTTGCGCAAGGCCGCTCAGGATCCTTACCACGAGGTAGATAATCCTCATGGTGTTATTCAGCTTGGTTTGGCCCATAACACGCTGTCTCTGGACTTGGTTCAGAATTGGATTCTCCAGAATGGAAGTGCTGCTATATTGGGCGGAGGAGAAAATTGCGGTGCCATGAATATCACTGGAATTGCACCTTACCAGCCCCACGATGGATTGATGGAGCTCAAAGTGGCTGTGGCTGGTTTTATGTCTCAAGTTATTGAAAAGTCAGTTTACTTCAACCCCTCACAAATGGTACTAACTGCTGGTGCCACCCCTGCTATCGAGATGCTTAGTTTCTGCCTAGCAGACAGGGGAAATGCATTCCTTGTTCCCACACCTCATAGCCCTGGCTTTGATGGCGATATAGAATGGCGGAGTGGTGTGGAGATGGTACCTGTTCCCTGCCGCAGCACTGATAACTTCAATTTAAGTATAACTGCACTTGACCGAGCCTTCAACCAGGCAAAGAAACGTGGTCAAAGAGTCCGTGGAATCATAATAACGAATCCCTCAAATCCTACTGGCAAATTGTTAAATCGGGACATGCTACTTGATCTTCTGGACTTTGCTAGAGATAAGAACATCCACATAATCTCCAATGAAATATTTGCAGGATCTGCTTGTGGAAACAAAGAGTTTGTGAGCATGGCAGAAATCATGGAAGCCGAAGATCTTGACCGGGACAGAGTTCATATGGTATTTAGTTTATCAAATGAGCTCTCTGTTCCAAATTTTGGGGTTGGTGTTATCTACTCCTATAATGAGAATGTCCTAGCTGCTTCTCGCAAATTGGCAAGATTCTCGGCTGTTTCTGCTCCAACCCAGCGATTTCTTATCTCCATGCTTTCAGATACAAGATTTGTACAGAAGTTCATTGAGATCAACAGATTGAGGCTTCGGAAAATGTATAGCACATTTGTGGCAGGATTGAAGCAGTTAGGGATTGAGTGCACGAATAGTAGTGGTGGTTTTTACTGCTGGGCGGACATGAGTAAGTTAATCCGGTCTTACAGTGAGAAGGGGGAGCTTGAGCTCTGGGATAGATTGTTGAATGTAGCTAAGATCAATGTTACCCCAGGATCCTCTTGTCACTGCATCGAACCTGGATGGTTCCGGTTTTGTTTTACTACATTGGCTGAAAAAGATGTTTCTGTAGTAATGGAACGGATTCAGAGCATTTCTGCAGCCACAAAATCACATAGTTGA	1560	0.4788	MRVIVPLQGVVQGRGGLFWGSVIPCALFYFLQLYFKNRRHPPPPPPHSPPSSPDPDPSSSSDKLHPHVPRSLSRILLSPRGTPGSAYVSGRASSVTRTTSDSPYYVGLRKAAQDPYHEVDNPHGVIQLGLAHNTLSLDLVQNWILQNGSAAILGGGENCGAMNITGIAPYQPHDGLMELKVAVAGFMSQVIEKSVYFNPSQMVLTAGATPAIEMLSFCLADRGNAFLVPTPHSPGFDGDIEWRSGVEMVPVPCRSTDNFNLSITALDRAFNQAKKRGQRVRGIIITNPSNPTGKLLNRDMLLDLLDFARDKNIHIISNEIFAGSACGNKEFVSMAEIMEAEDLDRDRVHMVFSLSNELSVPNFGVGVIYSYNENVLAASRKLARFSAVSAPTQRFLISMLSDTRFVQKFIEINRLRLRKMYSTFVAGLKQLGIECTNSSGGFYCWADMSKLIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLAEKDVSVVMERIQSISAATKSHS*	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g1029	519	Gene3D	Aspartate Aminotransferase, domain 1	114	507	IPR015422	GO:0003824
	Dod02g1029	519	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	2	513	-	-
	Dod02g1029	519	MobiDBLite	consensus disorder prediction	40	56	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	313	336	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	201	221	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	223	244	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	347	371	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	164	180	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	379	402	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	128	154	-	-
	Dod02g1029	519	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	277	301	-	-
	Dod02g1029	519	MobiDBLite	consensus disorder prediction	79	99	-	-
	Dod02g1029	519	PANTHER	AMINOTRANSFERASE ACS12-RELATED	2	513	-	-
	Dod02g1029	519	MobiDBLite	consensus disorder prediction	40	67	-	-
	Dod02g1029	519	SUPERFAMILY	PLP-dependent transferases	98	511	IPR015424	-
	Dod02g1029	519	CDD	AAT_like	170	509	-	-
	Dod02g1029	519	Gene3D	-	148	402	IPR015421	GO:0003824
	Dod02g1029	519	Pfam	Aminotransferase class I and II	126	508	IPR004839	GO:0009058\|GO:0030170

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g1029	Dod-Chr2	12954007	12957551	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g1029	K14270		-	jre:109010851	720.309

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod02g1029	02	12954007	12957551	Dod02g1029	02	12954007	12957551	ECH