Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1022 ATGTCAGCAACATCTAAATTGGGAGAAAAGTTAAGCACAAATGATGATACTAACCAACCTCCTTCACCATCACAAACTCAAAAATGCCATGTCAATCTGGTGAAGATGCTGGTTTCAGAGCTAAGAGTTCAACGAGGAATAGCCCTTCCAATGGTGGCGATGAACCTAGCATGGTTTGCCAAGACAGCCATCACAACGGCATTTTTGGGTCGCCTTGGGGAGCTAAGCTTAGCAGGTGGCGCCCTCGGGCTAACTTTTGCTAATGTCACTGGCTTCTCTGTCTTGAATGGTCTTTGCGGTGCTATGGAACCCATCTGCGGTCAAGCTCATGGGGCTAGAAACTTCAGGCTCCTTCACAAGACCCTTCTCATGACAATCTTATTGTTGCTATTGGTAACCATTCCCATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTCATTTTGGCCAGCATGAAGAGATCTCAACTGTGGCCAGGACCTATGTTTCCTATCTCATACCTGACTTGTTTGTCACCTCACTCTTCTGCCCCTTAAAAGCCTACTTGAGCTCCCAAAGCATAACTCTCCCGACCATGTTTAGTTCAGCTGTAGCACTAGCTTTCCACATACCAGTTAACATAGCACTCTCAAAGACCATGGGCCTCAGGGGGGTTGCCATGGGGGTTTGGATAACTGACCTTATCGTTGTGGTTCTGCTGGCCATTTATGTTATGATTCTTGAGAATAGAAAGGGAAGTAGGTGGAAGGAAGGAGGGTGGTGGGATCAGAGTATTGTGGATTGGATTAGGCTAATCAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTTGAGTGGTGGTGCTATGAGATTCTAGTCTTGCTCACTGGACACCTGTCAAATGCCAAGGAAGCAGTGGGAGTTTTGACAATTGTGCTAAACTTTGACTATTTGCTTTACTCAGTAATGCTAACACTGGCCACTTGTGTTTCCACCAGGGTCTCAAATGAACTTGGAGCCAACCAAGCTGGCCATGCTTACAGAGCAGCATGTGTGTCTCTGGCATTGGGATTCGTCTCAGGCTGCATAGGCAGCTTGGTGATGGTGGCAGCCAGGGGAATTTGGGGGCCGCTGTTTAGCCATGATAGGGGAATTATAAAGGGTGTGAAGAAGACAATGTTGTTGATGGCTCTGATCGAAGTGTTTAATTTTCCAGTGGCAGTTTGTGGAGGCATAGTTAGAGGGACAGCTAGACCATGGTTGGGCATGTATGCTAATCTAGGTGGATTTTACTTCCTGGCACTGCCCCTGGGTGTGGTTTTCGCCTTCAAACAACGACTTGGGCTAGCTGGACTCTTCATTGGACTCATTACTGGTATTGTTACATGCTTGACGCTGCTATTGGTATTTATTGCGAGGATTAACTGGGCGGAGGAAGCTGCCAAGGCACAATCACTAGCCAGTGATGAGAAGGAAGTTACCAAATATGACGCCGAGGAACGAATTGGGGCCAATGAAAATCATCAAGTATAA 1518 0.4657 MSATSKLGEKLSTNDDTNQPPSPSQTQKCHVNLVKMLVSELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGLTFANVTGFSVLNGLCGAMEPICGQAHGARNFRLLHKTLLMTILLLLLVTIPITFLWLNVDKILIHFGQHEEISTVARTYVSYLIPDLFVTSLFCPLKAYLSSQSITLPTMFSSAVALAFHIPVNIALSKTMGLRGVAMGVWITDLIVVVLLAIYVMILENRKGSRWKEGGWWDQSIVDWIRLIKLCGSCCLNTCLEWWCYEILVLLTGHLSNAKEAVGVLTIVLNFDYLLYSVMLTLATCVSTRVSNELGANQAGHAYRAACVSLALGFVSGCIGSLVMVAARGIWGPLFSHDRGIIKGVKKTMLLMALIEVFNFPVAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKQRLGLAGLFIGLITGIVTCLTLLLVFIARINWAEEAAKAQSLASDEKEVTKYDAEERIGANENHQV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1022 505 CDD MATE_eukaryotic 40 477 IPR045069 GO:0042910|GO:1990961
Dod02g1022 505 TIGRFAM matE: MATE efflux family protein 50 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1022 505 Pfam MatE 50 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1022 505 Pfam MatE 273 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g1022 505 PANTHER PROTEIN DETOXIFICATION 56 30 487 - -
Dod02g1022 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 487 - -
Dod02g1022 505 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1022 Dod-Chr2 12873947 12875854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1022 K03327 - gmx:100804083 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1022 02 12873947 12875854 Dod02g1022 02 12873947 12875854 ECH