Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1021 ATGGAGTGGCCTGCTTGTACGGACGAATACGAAAAGCTCATAATACGGATGAGCACCCCCAGGGTTGTCATTGACAATGTCGTCTGCTCCACAGCGACTCTGGTCAAGGTTGATAGTGCCAGAAGGCATGGTATACTCTTGGAAGCCGTACAAGTGCTCACTGATTTGAACCTTTCTATTAAGAAGGCCTATATTTCCTCTGATGGAAAGTGGTTCATGGATGTTTTCCATGTCACCGATCAACAAGGAAACAAGCTAACAGATGAGAGCGTTATAAAATATATTGAACAGTCACTTGGGAGTATTCACAACGTGAGAATTGAACCCTCAAACGGTCTAACTGCTTTGGAATTAACCGGAACAGACCGAGTTGGTCTTCTGTCGGAGGTTTTTGCTGTGCTAGCTGATCTGCAATGCAATGTGGTTGAGGCTAAGGTTTGGACTCACAATGGCCGCATTGCCTCCCTAATCTATGTAAAAGACTGTGATTCTGGGTCCACTATTGAGGACTCTCAGAAAATCAATAGGATTGAAGTGCGACTAAGGAATGTTTTAAATGGAGACAATGACATTAGAAGCGCAAAGACTAGTGTCTCTATGTCTGTCATGCACACGGAAAGAAGGCTGCATCAAATGATGTTTGCTGACCGTGACTACGAGAGGACTCCCATTCTCAAGTTTACATCCGATGCCCCCGTGGTGACCGTACAGAATTGGGCAGAAAGGGGTTATTCGGTTGTGAATGTTCAGTGCAAGGATCGAATCAAGCTCTTATTCGATGTTGTATGCAACTTGACAGACATGGAATATGTTGTTTTTCATGCTACCATTAATACTAATGGCGACCAAGCATACCTGGAATTTTATATAAGACATAGCGATGGCACCCCAATTAGTTCAGAACCAGAGCGTCAACGTGTCATTCAATGCTTAAAAGCTGCAGTTGAAAGAAGGGCATCTGAGGGTGTTCGATTAGAGCTCTGCACGGAAGATAGGCAGGGGCTTCTAGCAGAGGTTATGAGAACTTTCCGAGAGAATGGACTGAATGTCACAAGGGCTGAGATATCCACCGTAGGGAACATGGCTTCAAATGTGTTTTATGTGACGGATGCCATTGGGAACACAGCTGATCCAAAAATCATCGAATCTGTTAGGCAAAAAATTGGGTTAGGCAATTTAGAAGTGAAGGAGCTGCCATTGATGTGTCATCAGAAGGAAGAGAGAGAGGATCAAGCAGTTGGAGTTGGTGGGGCAGTGTGGTTGTCTATTGGGAGCCTTGTGAGGAGGAATTTGTACAATTTGGGACTAATTAAACCATGTTCTTAA 1326 0.4427 MEWPACTDEYEKLIIRMSTPRVVIDNVVCSTATLVKVDSARRHGILLEAVQVLTDLNLSIKKAYISSDGKWFMDVFHVTDQQGNKLTDESVIKYIEQSLGSIHNVRIEPSNGLTALELTGTDRVGLLSEVFAVLADLQCNVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKINRIEVRLRNVLNGDNDIRSAKTSVSMSVMHTERRLHQMMFADRDYERTPILKFTSDAPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTNGDQAYLEFYIRHSDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMASNVFYVTDAIGNTADPKIIESVRQKIGLGNLEVKELPLMCHQKEEREDQAVGVGGAVWLSIGSLVRRNLYNLGLIKPCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1021 441 SUPERFAMILY ACT-like 110 172 IPR045865 -
Dod02g1021 441 SUPERFAMILY ACT-like 29 102 IPR045865 -
Dod02g1021 441 Gene3D - 322 389 - -
Dod02g1021 441 Gene3D - 113 188 - -
Dod02g1021 441 CDD ACT_ACR_2 114 187 - -
Dod02g1021 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Dod02g1021 441 SUPERFAMILY ACT-like 320 389 IPR045865 -
Dod02g1021 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Dod02g1021 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Dod02g1021 441 CDD ACT_ACR_3 244 318 - -
Dod02g1021 441 CDD ACT_ACR_4 322 393 - -
Dod02g1021 441 Pfam ACT domain 116 169 IPR002912 -
Dod02g1021 441 ProSiteProfiles ACT domain profile. 34 110 IPR002912 -
Dod02g1021 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Dod02g1021 441 CDD ACT_ACR_1 32 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1021 Dod-Chr2 12864948 12868668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1021 - - gmx:100806283 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1021 02 12864948 12868668 Dod02g1021 02 12864948 12868668 ECH