Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0982 ATGAAGAATTGGCAGGGCAAGGATATAGAGAAGGATGTGGATGTGGTTGATATAGATAGAGATGCTGCTGAGTCATCATCTTCTTCTCGGAGAACGTGGTTTCAATCTGCTGATGGTAGGACTAAATCTCTTCATCCCCCGATTGAAACATATTTTCGTCTGCCTTCACCAGAGAGGAAAAAGCGTTCCTCTTCCTTCAAGTCACTCTTGGCTAACCCGGTCACCAAACTCAGAAAAAGTAAGAGCATGCAATTGATTATAGAAGGACCTCACGATCCAAAAGATGCCAAAATCGTGGAGTCCTTCCGCCAAATGCTTTTTCTTGAGGGTCTTGTATCTCCCAAGCTTAGTGATTATCATACTCTTTTGAGATTTCTGCGCATGAGAGATTTTGACCTGCCAAAATCCAAAGACGTGTATCTGAATTATCTGACATGGCGCAAGGAATTTCGAGTAGAAATGCTTCCTGAGGAATTCAGATTCCCGGAGTACACAGAAGTAAAGAAATGCTATCCTCATGGATACCATGGAGTTGATAAATATGGCAGGCCCATATATATTGAGAGATTAGGGATGATAGACCTTAACAGACTAATGAAAGTAACCACATTTGAAAGGTTTATCAAGTATCATGTGACACAACAAGAGAAAACAATGAGGATAAGATATCCAGCATGTTCATTGGCAGCTAAAAGGCACATTGCATCCACTATAAGTATCTTGGATGTCAACGGAGTAGGAGTGTCTAATTTCTCAAAGCCAGCAAGGTACCTCTTTATGGAAATTCAGAGGATCGATAGTAATTACTATCCGGAGACTCTTCATAAGCTCTTTATTATCAACGCCGGATCTGGGTTTAGGATGCTTTGGAAAGCCGTGAGGACATTCCTAGATGTACGCACAGTAGCAAAAGTTCAAGTGTTGGGCTCTAATTATCTTAGTGCGCTGCTTGAGGCTATTGAACCAAGCAATTTGCCAACTTTTATTGGTGGTAATTGCACATGTGCTGATTACGGAGGTTGCTTGATGAGTGATCGAGGACCATGGAAAAATCAAGACCTGTTACAAATGATTGAGGCCATTTCTTTGATAGACGAGATGGAGAGTAAAAGCGAAAATGGTGATGATGTGGCTCCAGAAGATTCCTTCATGCCCAAAAAGGATGACATGGAAACCAAAAGTGACTCTGGTTTGAGTCTGGCACTTGAGGAGATATCATGTGAAGGAACAGACTCGAAATATAAGTTAGCACTACAAAAAATTAGTGGGCTAGAAGCTGCTCTTGGAGACACCAGGAAGAAAATCGAGAAACTGGAAGGGGCACTTCAGGACACCAAGACGGCCTTGAAGGAACTTGCACAGCATATGGAACAGTCAAGAATGTGA 1386 0.4199 MKNWQGKDIEKDVDVVDIDRDAAESSSSSRRTWFQSADGRTKSLHPPIETYFRLPSPERKKRSSSFKSLLANPVTKLRKSKSMQLIIEGPHDPKDAKIVESFRQMLFLEGLVSPKLSDYHTLLRFLRMRDFDLPKSKDVYLNYLTWRKEFRVEMLPEEFRFPEYTEVKKCYPHGYHGVDKYGRPIYIERLGMIDLNRLMKVTTFERFIKYHVTQQEKTMRIRYPACSLAAKRHIASTISILDVNGVGVSNFSKPARYLFMEIQRIDSNYYPETLHKLFIINAGSGFRMLWKAVRTFLDVRTVAKVQVLGSNYLSALLEAIEPSNLPTFIGGNCTCADYGGCLMSDRGPWKNQDLLQMIEAISLIDEMESKSENGDDVAPEDSFMPKKDDMETKSDSGLSLALEEISCEGTDSKYKLALQKISGLEAALGDTRKKIEKLEGALQDTKTALKELAQHMEQSRM* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0982 461 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 37 459 - -
Dod02g0982 461 SMART sec14_4 163 334 IPR001251 -
Dod02g0982 461 Coils Coil 421 455 - -
Dod02g0982 461 MobiDBLite consensus disorder prediction 369 394 - -
Dod02g0982 461 SMART CRAL_TRIO_N_2 118 143 IPR011074 -
Dod02g0982 461 MobiDBLite consensus disorder prediction 369 395 - -
Dod02g0982 461 SUPERFAMILY CRAL/TRIO domain 162 357 IPR036865 -
Dod02g0982 461 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 37 459 - -
Dod02g0982 461 Pfam CRAL/TRIO domain 171 331 IPR001251 -
Dod02g0982 461 SUPERFAMILY CRAL/TRIO N-terminal domain 89 158 IPR036273 -
Dod02g0982 461 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 163 337 IPR001251 -
Dod02g0982 461 CDD SEC14 164 332 IPR001251 -
Dod02g0982 461 Gene3D - 152 362 IPR036865 -
Dod02g0982 461 Gene3D - 56 150 - -
Dod02g0982 461 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0982 Dod-Chr2 12425439 12431122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0982 121 328 Acyl Lipid Metabolism Gene Families AT1G55840 26.667 8.87e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0982 - - aip:107643040 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0982 02 12425439 12431122 Dod02g0982 02 12425439 12431122 ECH