Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0975 ATGGTCATGGAACCTCGCAATGCGGCTTTTCCAAAACGGTTGCTGATGTTGTCGTTTTGGCTATTGTTTGTGTCCGCCACGTCATACAGCATCGAAGCGATGTCGTCGTCGTCGTCTGAACAGAGGCACAAGAATGCTTACGCAACGATGATGTACGTGGGAACACCTAGGGACTACGAGTTCTACGTGGCCGTGCGGGTGCTCCTTAAATCTCTCTCCAATCTTAACGTTGAAGCCGATCTCATCGTCGTTGCCTCCGTCGACGTCCCTCTCCGCTGGATTCGAGCTTTCGAAGAGGAAGATGGTGCTAAAGTGGTAAGGGTGGAAAACATGGACAATCCATACAAGCATCAAGATAATTTTGACAAGAGGTTCAAGCTATCGCTGAACAAGATCTACGCGTGGAGCCTAGTGGACTACGACAGGGTAGTCATGCTGGACGCTGACAACCTCTTCCTTCAAGACACGGATGAGTTGTTTCAATGTGGTCAATTTTGTGCGGTCTTTATCAATCCTTGCGTCTTCCACACTGGCCTCTTCGTCTTGCAGCCATCAATGATGGTGTTCAAGGACATGGTTCATGAATTAGAGAATGGGAGAGACAATCCAGATGGTGCTGACCAGGGTTTTATAGCTAGCTACTTCCCGGAGTTGCTTGATAAGCCAATGTTTCATCCAACGCCAAATGGCACAAACCTTGATGGAACATATAGGCTTCCTTTGGGTTATCAGATGGATGCTTCTTACTACTATCTTAAACTTCGATGGAGCATACCCTGTGGACCAAATAGTGTGATCACATTCCCAGGGGCACCATGGTTGAAGCCATGGTATTGGTGGTCGTGGCCTGTCCTTCCACTAGGTCTCCATTGGCATGAACAACGCCGTCAAACCTTGGGGTATGGTGCAGAGATGGCTGTAGTACTTATCCAATCTGCAATATATCTTGGGATAATAGCGATGACGCGTTTGGCAAGGCCAAGCCTCTCAAAGCTGTGTTATAGGCGCTCTGATAAGAGCATCAACCTGGTGCAAACCTGCCTCAAATTAGTAGCTTTGTGGTGCATCCTTGCTGCTTACGCAACACCATTCTTTATCATTCCTCGCACGGTTCACCCTCTTCTGGGGTGGGGTCTGTATTTGCTTGGTGCTTTTGCACTTTGCTCAATTGCAGCCAATGTATTTCTGCTGCCAATATTGCCAGTTTTGGTACTTTGGCTTGGGATTCTTGGGGCCCTGCTGGTTATGGCATTTCCTTGGTACCCTGATGGGGTAGTAAGAGCTCTTTCTGTGTTTGTTTACGCCTTCTGTTATTCACCAATTGTGTGGGTATCTGTTGTAAGGACCGCTGGTTTGATCAGAGGCCCAGTTAGATTAGCTGAGCATTATAGCCACTGCATTTTCCATGACATGAAGAATCTTGGGAACGAGGAGGAGGCCAGAGCCTTGAGTGCAACAGTGACATGTGCAGCACCCTATAGCACCTTCACAACATTATTAACTTCTTCCACGAACTCCTCATCCTCCTCCTCCTTCTCTTCAAATCGGAACCACAGCTGGGTGGGACCCATCGGTCACCGTCTAATAACCGTTGACGTTAATGGAGGTGGGCAGTTCCGGTCCGTGCAAGACGCCGTCAATGCCGTCCCAGACAACAATACAATGAACATCCTTATTCAAATCAGCGCCGGATACTACGTAGAGAAGGTGGTGGTGCCGGGGACGAAGCCGTACATAACGTTTCAGGGGGAGGGAAAGGAAGTGACGGTGATAGAGTGGCATGATAGGGCCAGTGACCCTGGGCCCAATGGCCAGCAGCTGCGTACTTACAGAACTGCTTCTGTTACCGTTTTTGCCAGCTATTTCTCCGCTAGGAACATCAGCTTTAAGCACCTGCACCAATGCCGGGGATGCAGGGATGGCAAGCCGCGGCAGTTTAGGATATCAGGGGACAAAGCGTACTTCTCCGGCTGTGGCTTCTACGGTGCACAAGACACTCTTTGCGACGACGCTGGCAGACATTACTTCAAGGAATGCTATATCCAAGGCTCCATTGATTTCATTTTTGGGAATGGCAGGTCCATGTATAAGGATTGCGAGCTACACTCAATAGCAACGAGGTTCGGTTCCATAGCAGCCCACGATAGGAAATACCCATACGAGAAGACAGGGTTCGCATTCGTGAGATGCAGGGTGACGGGTACAGGCCCGCTCTATGTGGGCAGAGCAATGGGCCAGTACTCAAGGATTGTCTACTCCTACACATATTTCGATGATATAGTTGCTCATGGTGGTTGGGATGATTGGGACCATGCCAACAACAAGACCAAAACAGTGTTCTTTGGAGTGTACAAGTGTTCGGGACCAGGAGCAGAGGCAGTACGTGGAGTCTCATGGGCCCGGGAGCTAGATTTTGAATCTGCCCACCCATTTATCCGCAAGAGCTTCGTCAATGGGAGACATTGGATCGCACCCTCTGATGCCTAG 2487 0.4946 MVMEPRNAAFPKRLLMLSFWLLFVSATSYSIEAMSSSSSEQRHKNAYATMMYVGTPRDYEFYVAVRVLLKSLSNLNVEADLIVVASVDVPLRWIRAFEEEDGAKVVRVENMDNPYKHQDNFDKRFKLSLNKIYAWSLVDYDRVVMLDADNLFLQDTDELFQCGQFCAVFINPCVFHTGLFVLQPSMMVFKDMVHELENGRDNPDGADQGFIASYFPELLDKPMFHPTPNGTNLDGTYRLPLGYQMDASYYYLKLRWSIPCGPNSVITFPGAPWLKPWYWWSWPVLPLGLHWHEQRRQTLGYGAEMAVVLIQSAIYLGIIAMTRLARPSLSKLCYRRSDKSINLVQTCLKLVALWCILAAYATPFFIIPRTVHPLLGWGLYLLGAFALCSIAANVFLLPILPVLVLWLGILGALLVMAFPWYPDGVVRALSVFVYAFCYSPIVWVSVVRTAGLIRGPVRLAEHYSHCIFHDMKNLGNEEEARALSATVTCAAPYSTFTTLLTSSTNSSSSSSFSSNRNHSWVGPIGHRLITVDVNGGGQFRSVQDAVNAVPDNNTMNILIQISAGYYVEKVVVPGTKPYITFQGEGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFASYFSARNISFKHLHQCRGCRDGKPRQFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIQGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKYPYEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKTKTVFFGVYKCSGPGAEAVRGVSWARELDFESAHPFIRKSFVNGRHWIAPSDA* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0975 828 CDD GT8_Glycogenin 45 297 - -
Dod02g0975 828 ProSitePatterns Pectinesterase signature 2. 681 690 IPR033131 -
Dod02g0975 828 Gene3D - 527 827 IPR012334 -
Dod02g0975 828 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 43 293 IPR029044 -
Dod02g0975 828 SUPERFAMILY Nucleotide-diphospho-sugar transferases 51 283 IPR029044 -
Dod02g0975 828 SUPERFAMILY Pectin lyase-like 526 825 IPR011050 -
Dod02g0975 828 Pfam Pectinesterase 529 819 IPR000070 GO:0030599|GO:0042545
Dod02g0975 828 PANTHER GLUCURONOSYLTRANSFERASE PGSIP8 7 449 - -
Dod02g0975 828 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0975 Dod-Chr2 12333925 12346531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0975 12 451 Miscellaneous Gene Families AT4G16600 68.035 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0975 - - gmx:100809500 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0975 02 12333925 12346531 Dod02g0975 02 12333925 12346531 ECH
Dod02g0975 02 12333925 12346531 Dod05g1370 05 37786818 37795303 PCT