Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0943 ATGGCTACCGCTTCTGCCAAAAGGTGGCTTCCTCTCGAAGCTAACCCTGACGTCATGAACCAGTTCCTTAGGGGGCTTGGGCTTCCACAGGATGAAGCAGAGTGTTGTGATGTTTACGGCTTAGATGATGACCTTCTTGAATTGGTCCCTAACCCTGTTCTTGCCGTCCTTTTTCTTTATCCCATAACCACTCAGACTGAAGAAGAGAGGTTGCAACAGGACAATGAAAAAGGGGAATATAGCAGTAAAGTTTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAATAGGACTGCTTCATGCTATTGGAAACAACACTTCTGCGGTTAAGCTTGCTGAGGGGTCATTCTTTGATAAGTTCTTTAAATCTACTGCAAGCTTGGATCCGTTGCAGCGTGCAGCATTTCTTGAGAATGATGGAGAAATGGAAGTTGCTCATTCAGTTGCAGCAAATGCTGGTGATACAGAGGCAGCAGATAATGCATATGCTCATTTTATCTGCTTTGCTTGTGTCGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCAGGGCCAATATCTCATGGTGCATCTTCACCAAGTACTTTGTTGAGGGATGCAGCTAAAGTCATACAGAGCATGATCCAGAAAAATCCAGACTCCCACAACTTCAATGTCATTGCCGTATCAAAGAAATCCAAGGATGGATATTAA 699 0.4335 MATASAKRWLPLEANPDVMNQFLRGLGLPQDEAECCDVYGLDDDLLELVPNPVLAVLFLYPITTQTEEERLQQDNEKGEYSSKVYFMKQTVGNACGTIGLLHAIGNNTSAVKLAEGSFFDKFFKSTASLDPLQRAAFLENDGEMEVAHSVAANAGDTEAADNAYAHFICFACVDGELYELDGRKSGPISHGASSPSTLLRDAAKVIQSMIQKNPDSHNFNVIAVSKKSKDGY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0943 232 SUPERFAMILY Cysteine proteinases 7 226 IPR038765 -
Dod02g0943 232 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 9 210 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 230 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 230 - -
Dod02g0943 232 CDD Peptidase_C12_UCH_L1_L3 9 223 - -
Dod02g0943 232 Gene3D - 3 227 IPR036959 GO:0004843|GO:0006511
Dod02g0943 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 11 28 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 49 61 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 177 187 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 161 172 IPR001578 GO:0004843|GO:0006511
Dod02g0943 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 89 106 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0943 Dod-Chr2 11960148 11964946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0943 K05609 - gmx:100527718 398.282