Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0887 ATGGCAGACTTACCAGGATATGTGCGTTCGTGCTTGAACACGGGGAAACTTGCCTTTCTGGCAATTTTTGTCTCTGGAGGAATCGTCCTGCAAATTTTGGCATGTGCCTTGTACAATAATTGGTGGCCAATGTTAAGTGCAATAACATATGTGCTCCTTCCAATGCCTTTGTTGTTCTTTGCGGGGTCAAATGGTTCTTCAGTATTTTCTGAATCCAATAATAGCTGGGTCAATTTAGCCAAGTTCTTGACCGGGTTCTCAACTATTGGAAGCATTGCCATTCCGAGCATACTAAAGCATTCTGGTGCTATTGGTTGGGGAGCCTTTGCCATGGAACTCTGCTCCTTCTTTGTGTTTGTATTAGCCATACTGTGTTTCATGTGGATGAGTGATGATGATGATTACAGCATGCTATAA 417 0.4293 MADLPGYVRSCLNTGKLAFLAIFVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFFAGSNGSSVFSESNNSWVNLAKFLTGFSTIGSIAIPSILKHSGAIGWGAFAMELCSFFVFVLAILCFMWMSDDDDYSML* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0887 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Dod02g0887 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
Dod02g0887 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0887 Dod-Chr2 11374905 11377272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0887 1 134 EF-hand Containing Proteins AT1G32410 68.657 8.72e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0887 - - gmx:100500037 234.958